Clear
Retried
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:MERGE_SENTIEON_HAPLOTYPER_VCFS (Sig_18_Blood) 28s 20s 6s 2s 295.5 MB 158% 95.8 MB 737.2 KB 0 bytes 744.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (Sig_18_Blood) 9s 5s - - 3.3 MB 22% 2.2 MB 108.4 KB 0 bytes 112.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (Sig_18_Blood) 53s 39s 3s 10s 502.0 MB 302% 157.5 MB 1.5 MB 0 bytes 1.5 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:GERMLINE_CNV (Sig_18_Blood) 53s 20s 24s 8s 487.8 MB 123% 3.2 GB 187.7 KB 0 bytes 196.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:MOSDEPTH (Sig_18_Blood) 47s 11s 23s 13s 1.9 GB 111% 213.5 MB 7.4 MB 199.1 MB 7.4 MB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:SAMTOOLS_STATS (Sig_18_Blood) 19s 4s 5s 10s 8.8 MB 127% 199.3 MB 128.0 KB 0 bytes 128.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNFILTER (Sig_18_Blood) 19s 7s 2s 9s 478.8 MB 984% 12.4 MB 339.8 KB 0 bytes 25.4 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNHAPLOTYPER2 (Sig_18_Blood) 1m 24s 47s 4s 32s 507.7 MB 841% 778.6 MB 430.3 KB 0 bytes 8.1 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:DIFF_DV_SENTIEON (Sig_18_Blood) 14s 11s 0s 2s 12.7 MB 1178% 8.3 MB 18.1 KB 0 bytes 28.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:MERGE_FORCECALLED (Sig_18_Blood) 8s 6s 0s 1s 3.6 MB 2481% 1.1 MB 811.6 KB 0 bytes 96.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_CANDIDATES:BCFTOOLS_NORM (Sig_18_Blood) 29s 10s 8s 10s 19.5 MB 134% 3.0 GB 212.6 KB 0 bytes 224.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:SPLIT_MULTIALLELIC (Sig_18_Blood) 25s 7s 8s 9s 33.8 MB 192% 3.0 GB 197.1 KB 0 bytes 208.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:VCF_ANNOTATE_INDEL_ENTROPY:BCFTOOLS_QUERY (Sig_18_Blood) 8s 7s 0s 0s 3.5 MB 1308% 156.3 KB 1.4 KB 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_CANDIDATES:BCFTOOLS_SORT (Sig_18_Blood) 4s 2s - - 18.2 MB 2028% 627.3 KB 524.8 KB 0 bytes 536.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:VCF_ANNOTATE_INDEL_ENTROPY:INDEL_ENTROPY_ANNOTATION (Sig_18_Blood) 17s 15s 1s 0s 14.1 MB 1886% 31.2 MB 340.0 KB 0 bytes 348.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:GT_CORRECTION (Sig_18_Blood) 11s 5s 3s 2s 1.4 GB 185% 68.6 MB 42.7 KB 0 bytes 56.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_GERMLINE:BCFTOOLS_NORM (Sig_18_Blood) 23s 3s 8s 11s 19.7 MB 140% 3.0 GB 200.9 KB 0 bytes 212.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:SENTIEON_HAPLOTYPER_RF_FILTER (Sig_18_Blood) 12s 3s 5s 3s 1.9 GB 293% 81.2 MB 58.3 KB 0 bytes 64.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_GERMLINE:BCFTOOLS_SORT (Sig_18_Blood) 4s 2s - - 15.0 MB 2229% 466.2 KB 364.0 KB 0 bytes 376.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_CHIP_PON (Sig_18_Blood) 8s 5s 1s 1s 382.0 MB 297% 16.5 MB 57.5 KB 0 bytes 64.0 KB 1
27 items found |
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