Clear
Retried
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:GERMLINE_CNV (HCC1395_BL) 33s 9s 15s 8s 406.4 MB 183% 3.2 GB 187.7 KB 0 bytes 196.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:MERGE_SENTIEON_HAPLOTYPER_VCFS (HCC1395_BL) 21s 17s 2s 2s 288.7 MB 324% 95.9 MB 734.6 KB 0 bytes 740.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNHAPLOTYPER2 (HCC1395_BL) 1m 19s 39s 3s 36s 392.9 MB 713% 683.7 MB 366.7 KB 0 bytes 8.0 MB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:MOSDEPTH (HCC1395_BL) 37s 3s 24s 10s 1.9 GB 106% 167.2 MB 6.1 MB 138.5 MB 6.1 MB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (HCC1395_BL) 47s 34s 2s 10s 367.0 MB 326% 147.5 MB 1.3 MB 0 bytes 1.4 MB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:SAMTOOLS_STATS (HCC1395_BL) 17s 3s 3s 11s 9.0 MB 132% 155.6 MB 125.8 KB 0 bytes 128.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (HCC1395_BL) 4s 2s - - 3.2 MB 112% 2.1 MB 108.4 KB 0 bytes 112.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:DIFF_DV_SENTIEON (HCC1395_BL) 8s 6s 0s 1s 17.5 MB 4392% 8.3 MB 18.1 KB 0 bytes 28.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNFILTER (HCC1395_BL) 19s 5s 2s 11s 477.5 MB 5261% 10.4 MB 316.2 KB 0 bytes 25.4 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:MERGE_FORCECALLED (HCC1395_BL) 32s 31s 0s 0s 3.6 MB 6006% 1.1 MB 799.7 KB 0 bytes 88.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:SPLIT_MULTIALLELIC (HCC1395_BL) 25s 9s 6s 9s 33.9 MB 318% 3.0 GB 194.9 KB 0 bytes 204.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_CANDIDATES:BCFTOOLS_NORM (HCC1395_BL) 24s 8s 7s 8s 34.0 MB 289% 3.0 GB 204.6 KB 0 bytes 216.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:VCF_ANNOTATE_INDEL_ENTROPY:BCFTOOLS_QUERY (HCC1395_BL) 4s 2s 0s 1s 32.5 MB 4610% 162.5 KB 1.3 KB 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_CANDIDATES:BCFTOOLS_SORT (HCC1395_BL) 18s 16s - - 21.7 MB 6389% 567.1 KB 455.9 KB 0 bytes 468.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:VCF_ANNOTATE_INDEL_ENTROPY:INDEL_ENTROPY_ANNOTATION (HCC1395_BL) 24s 21s 0s 2s 15.7 MB 4490% 31.2 MB 328.5 KB 0 bytes 336.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:SENTIEON_HAPLOTYPER_RF_FILTER (HCC1395_BL) 11s 5s 2s 3s 1.7 GB 860% 81.2 MB 53.5 KB 0 bytes 64.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:GT_CORRECTION (HCC1395_BL) 10s 5s 2s 2s 1.8 GB 805% 68.6 MB 40.3 KB 0 bytes 56.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_GERMLINE:BCFTOOLS_SORT (HCC1395_BL) 4s 3s - - 23.7 MB 5301% 459.7 KB 353.1 KB 0 bytes 360.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_GERMLINE:BCFTOOLS_NORM (HCC1395_BL) 25s 7s 7s 10s 33.9 MB 291% 3.0 GB 198.3 KB 0 bytes 208.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_GERMLINE (HCC1395_BL) 9s 7s 0s 1s 16.2 MB 4606% 11.2 MB 50.4 KB 0 bytes 56.0 KB 1
27 items found |
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