Sample raw_total_sequences filtered_sequences sequences is_sorted 1st_fragments last_fragments reads_mapped reads_mapped_and_paired reads_unmapped reads_properly_paired reads_paired reads_duplicated reads_MQ0 reads_QC_failed non-primary_alignments supplementary_alignments total_length total_first_fragment_length total_last_fragment_length bases_mapped bases_mapped_(cigar) bases_trimmed bases_duplicated mismatches error_rate average_length average_first_fragment_length average_last_fragment_length maximum_length maximum_first_fragment_length maximum_last_fragment_length average_quality insert_size_average insert_size_standard_deviation inward_oriented_pairs outward_oriented_pairs pairs_with_other_orientation pairs_on_different_chromosomes percentage_of_properly_paired_reads_(%) reads_mapped_percent reads_mapped_and_paired_percent reads_unmapped_percent reads_properly_paired_percent reads_paired_percent reads_duplicated_percent reads_MQ0_percent reads_QC_failed_percent reads_mapped_MQ1
HCC1395_BL 1953382.0 0.0 1953382.0 1.0 976691.0 976691.0 1953366.0 1953350.0 16.0 1952036.0 1953382.0 396954.0 252998.0 0.0 0.0 2166.0 281735355.0 140864954.0 140870401.0 281733019.0 281229349.0 0.0 57612516.0 1263427.0 0.004492515 144.0 144.0 144.0 150.0 150.0 150.0 32.1 301.7 147.5 897887.0 78432.0 254.0 102.0 99.9 99.99918090777943 99.99836181555885 0.0008190922205692486 99.93109386694461 100.0 20.321370832740346 12.951793351223673 0.0 1700368.0
HCC1395_tumor 5349316.0 0.0 5349316.0 1.0 2674658.0 2674658.0 5349282.0 5349248.0 34.0 5343662.0 5349316.0 2082256.0 701775.0 0.0 0.0 6793.0 769107163.0 384545346.0 384561817.0 769102063.0 767767767.0 0.0 299604695.0 3474590.0 0.004525574 144.0 144.0 144.0 150.0 150.0 150.0 32.6 292.3 143.4 2444037.0 228791.0 814.0 982.0 99.9 99.99936440472015 99.99872880944031 0.0006355952798451242 99.89430424375752 100.0 38.92564955968202 13.118966985685645 0.0 4647507.0
Sig_18_Blood 2478584.0 0.0 2478584.0 1.0 1239292.0 1239292.0 2478565.0 2478546.0 19.0 2477470.0 2478584.0 372061.0 307164.0 0.0 0.0 2699.0 359092383.0 179542840.0 179549543.0 359089650.0 358473570.0 0.0 54290495.0 1641039.0 0.004577852 145.0 145.0 145.0 150.0 150.0 150.0 32.1 309.3 150.4 1148194.0 90749.0 230.0 100.0 100.0 99.99923343328288 99.99846686656575 0.0007665667171255847 99.95505498300643 100.0 15.01103049160327 12.392721005219109 0.0 2171401.0
Sig_18_tissue 12309726.0 0.0 12309726.0 1.0 6154863.0 6154863.0 12309648.0 12309582.0 78.0 12296078.0 12309726.0 3883866.0 1479224.0 0.0 0.0 21987.0 1737489441.0 868720626.0 868768815.0 1737478221.0 1734779711.0 0.0 546365725.0 7288871.0 0.004201612 141.0 141.0 141.0 150.0 150.0 150.0 32.1 239.5 114.7 5386887.0 764111.0 1333.0 2460.0 99.9 99.99936635470196 99.99883019329594 0.000633645298035066 99.88912832015919 100.0 31.551197808952043 12.016709388982338 0.0 10830424.0