File Info
- Filename
- 1173_JXL-T1-TDNA-01_A23KCGYLT4_1_vs_1173_JXL-N1-BDNA-01_B23KGCJLT4_1.manta_fusion.fusion_calls.tsv
- Full Path
- s3://natera-platform-sandbox/platform-users/rsrivas/pipeline_runs/somatic_sv_dev/manta_fusion_7sample_validation_0514-1620__269416e3--20260514-162000/variant_calling/manta_fusion/1173_JXL-T1-TDNA-01_A23KCGYLT4_1_vs_1173_JXL-N1-BDNA-01_B23KGCJLT4_1/1173_JXL-T1-TDNA-01_A23KCGYLT4_1_vs_1173_JXL-N1-BDNA-01_B23KGCJLT4_1.manta_fusion.fusion_calls.tsv
- Size
- 861 bytes
- Workflow Run
- manta_fusion_7sample_validation_0514-1620
- Published
- May 14, 2026 10:05 AM
Content
View in new tab| specimen | gene1 | gene2 | chr1 | pos1 | chr2 | pos2 | sv_type | event_id | score | filter_call | pon_bp1_count | pon_bp2_count | pon_pair_count | cosmic_hit | somaticscore | manual_vaf | is_pass | is_interchrom | is_paralog_of_higher_score_call |
| 1173_JXL-T1-TDNA-01_A23KCGYLT4_1_vs_1173_JXL-N1-BDNA-01_B23KGCJLT4_1.manta_fusion | ARFGAP3 | PACSIN2 | chr22 | 42806825 | chr22 | 42882298 | DUP | MantaDUP:TANDEM:1878:0:1:0:0:0 | 0.948 | PASS | 0 | 0 | 0 | 0 | 189.0 | 0.30870279146141216 | 1 | 0 | 0 |
| 1173_JXL-T1-TDNA-01_A23KCGYLT4_1_vs_1173_JXL-N1-BDNA-01_B23KGCJLT4_1.manta_fusion | DYSF | HLA-DRB1 | chr2 | 71603570 | chr6 | 32579077 | BND | MantaBND:0:30184:30295:0:0:0:1 | 0.014 | FAIL | 0 | 553 | 0 | 0 | 30.0 | 0.011968085106382979 | 1 | 1 | 0 |
| 1173_JXL-T1-TDNA-01_A23KCGYLT4_1_vs_1173_JXL-N1-BDNA-01_B23KGCJLT4_1.manta_fusion | MUC3A | . | chr7 | 100958578 | chrUn_JTFH01001084v1_decoy | 1341 | BND | MantaBND:0:27530:27531:12:0:0:0 | 0.0 | FAIL | 241 | 0 | 0 | 0 | 46.0 | 0.01444043321299639 | 1 | 1 | 0 |
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