|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:TABIX_TABIX (Sig_18_Blood)
|
4s |
3s |
- |
- |
3.3 MB |
149% |
138.3 KB |
5.1 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:BCFTOOLS_STATS (Sig_18_Blood)
|
5s |
4s |
- |
- |
23.2 MB |
5063% |
155.1 KB |
18.0 KB |
0 bytes |
24.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_REPEATMASKER:BCFTOOLS_ANNOTATE (Sig_18_Blood)
|
5s |
2s |
1s |
2s |
333.6 MB |
1060% |
38.8 MB |
44.4 KB |
0 bytes |
56.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:VCFTOOLS_TSTV_COUNT (Sig_18_Blood)
|
5s |
2s |
- |
- |
9.7 MB |
76% |
87.6 KB |
2.3 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:VCFTOOLS_TSTV_QUAL (Sig_18_Blood)
|
5s |
3s |
- |
- |
9.9 MB |
104% |
87.3 KB |
14.9 KB |
0 bytes |
24.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:VCFTOOLS_SUMMARY (Sig_18_Blood)
|
4s |
2s |
- |
- |
9.6 MB |
75% |
87.6 KB |
2.4 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_BLACKLIST:BCFTOOLS_ANNOTATE (Sig_18_Blood)
|
5s |
3s |
- |
- |
3.2 MB |
8668% |
221.4 KB |
44.6 KB |
0 bytes |
56.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_LOWDEPTH:BCFTOOLS_ANNOTATE (Sig_18_Blood)
|
5s |
4s |
1s |
0s |
14.7 MB |
6580% |
263.8 KB |
44.8 KB |
0 bytes |
56.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (Sig_18_Blood)
|
30s |
3s |
23s |
4s |
2.7 GB |
306% |
170.9 MB |
3.6 MB |
0 bytes |
764.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (Sig_18_Blood)
|
4s |
3s |
- |
- |
3.1 MB |
99% |
566.8 KB |
62.7 KB |
0 bytes |
68.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:ENSEMBLVEP_VEP (Sig_18_Blood)
|
14s |
3s |
2s |
9s |
265.2 MB |
202% |
69.6 MB |
1.9 MB |
87.3 MB |
148.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:TABIX_TABIX (Sig_18_Blood)
|
4s |
3s |
- |
- |
3.2 MB |
62% |
224.2 KB |
5.1 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:TABIX_VCF_FOR_ENTROPY (Sig_18_Blood)
|
6s |
4s |
- |
- |
3.3 MB |
59% |
117.1 KB |
3.3 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:FASTQ_ALIGN_BWAMEM_MEM2_DRAGMAP_SENTIEON:SENTIEON_BWAMEM (Sig_18_Blood)
|
4m 2s |
1m 18s |
2m 34s |
9s |
64.0 GB |
1295% |
5.3 GB |
105.2 MB |
0 bytes |
23.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:FASTQ_ALIGN_BWAMEM_MEM2_DRAGMAP_SENTIEON:SENTIEON_BWAMEM (Sig_18_Blood)
|
4m 1s |
1m 18s |
2m 32s |
10s |
64.0 GB |
1294% |
5.3 GB |
105.3 MB |
0 bytes |
23.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:FASTQ_ALIGN_BWAMEM_MEM2_DRAGMAP_SENTIEON:SENTIEON_BWAMEM (Sig_18_Blood)
|
4m 2s |
1m 17s |
2m 33s |
11s |
64.0 GB |
1303% |
5.3 GB |
105.4 MB |
0 bytes |
24.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:FASTQ_ALIGN_BWAMEM_MEM2_DRAGMAP_SENTIEON:SENTIEON_BWAMEM (Sig_18_Blood)
|
4m 7s |
1m 17s |
2m 38s |
11s |
64.0 GB |
1300% |
5.3 GB |
105.3 MB |
0 bytes |
23.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:FASTQ_ALIGN_BWAMEM_MEM2_DRAGMAP_SENTIEON:SENTIEON_BWAMEM (Sig_18_Blood)
|
4m 6s |
1m 17s |
2m 37s |
11s |
64.0 GB |
1297% |
5.3 GB |
105.5 MB |
0 bytes |
24.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:FASTQ_ALIGN_BWAMEM_MEM2_DRAGMAP_SENTIEON:SENTIEON_BWAMEM (Sig_18_Blood)
|
4m 2s |
1m 17s |
2m 35s |
9s |
64.0 GB |
1306% |
5.3 GB |
105.3 MB |
0 bytes |
23.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:FASTQ_ALIGN_BWAMEM_MEM2_DRAGMAP_SENTIEON:SENTIEON_BWAMEM (Sig_18_Blood)
|
4m 13s |
1m 9s |
2m 43s |
20s |
64.0 GB |
1292% |
5.3 GB |
105.4 MB |
0 bytes |
24.0 MB |
1 |