|
succeeded
|
NFCORE_SAREK:SAREK:BAM_SENTIEON_DEDUP:SENTIEON_DEDUP (HCC1395_BL)
|
35s |
2s |
20s |
12s |
355.0 MB |
508% |
4.1 GB |
289.3 MB |
0 bytes |
336.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_SENTIEON_DEDUP:SENTIEON_DEDUP (HCC1395_tumor)
|
46s |
2s |
32s |
11s |
524.7 MB |
499% |
5.1 GB |
737.6 MB |
0 bytes |
781.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_SENTIEON_DEDUP:SENTIEON_DEDUP (Sig_18_Blood)
|
37s |
2s |
22s |
12s |
392.6 MB |
507% |
4.2 GB |
363.3 MB |
0 bytes |
409.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_SENTIEON_DEDUP:SENTIEON_DEDUP (Sig_18_tissue)
|
1m 21s |
3s |
1m 0s |
17s |
875.0 MB |
471% |
7.8 GB |
1.7 GB |
0 bytes |
1.7 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_BATCH (HCC1395_BL)
|
51s |
14s |
28s |
9s |
3.9 GB |
214% |
4.3 GB |
108.4 MB |
0 bytes |
108.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_BATCH (Sig_18_Blood)
|
51s |
11s |
31s |
9s |
3.9 GB |
206% |
4.6 GB |
134.1 MB |
0 bytes |
134.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_GERMLINE_MANTA:MANTA_GERMLINE (HCC1395_BL)
|
49s |
6s |
34s |
9s |
89.5 MB |
134% |
3.2 GB |
3.2 MB |
0 bytes |
2.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_GERMLINE_MANTA:MANTA_GERMLINE (Sig_18_Blood)
|
49s |
6s |
34s |
9s |
92.1 MB |
142% |
3.0 GB |
3.2 MB |
0 bytes |
2.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:GATK4_HAPLOTYPECALLER (HCC1395_BL)
|
1m 10s |
3s |
47s |
20s |
940.5 MB |
245% |
270.1 MB |
1.1 MB |
0 bytes |
1.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:GATK4_HAPLOTYPECALLER (HCC1395_BL)
|
32s |
2s |
10s |
20s |
788.2 MB |
325% |
175.0 MB |
1.1 MB |
0 bytes |
1.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:GATK4_HAPLOTYPECALLER (Sig_18_Blood)
|
44s |
3s |
19s |
22s |
898.8 MB |
324% |
177.6 MB |
1.1 MB |
0 bytes |
1.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:GATK4_HAPLOTYPECALLER (Sig_18_Blood)
|
1m 24s |
3s |
1m 3s |
18s |
1.1 GB |
250% |
281.8 MB |
1.1 MB |
0 bytes |
1.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:MERGE_HAPLOTYPECALLER (HCC1395_BL)
|
8s |
3s |
4s |
1s |
235.4 MB |
310% |
95.9 MB |
737.1 KB |
0 bytes |
744.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_HAPLOTYPECALLER:MERGE_HAPLOTYPECALLER (Sig_18_Blood)
|
7s |
3s |
2s |
2s |
214.6 MB |
303% |
95.9 MB |
739.6 KB |
0 bytes |
744.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:MERGE_SENTIEON_HAPLOTYPER_VCFS (HCC1395_BL)
|
8s |
3s |
3s |
2s |
251.6 MB |
321% |
95.9 MB |
734.5 KB |
0 bytes |
740.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:MERGE_SENTIEON_HAPLOTYPER_VCFS (Sig_18_Blood)
|
8s |
3s |
3s |
2s |
235.7 MB |
315% |
95.9 MB |
737.2 KB |
0 bytes |
744.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:SENTIEON_HAPLOTYPER (HCC1395_BL)
|
15s |
3s |
2s |
9s |
342.8 MB |
350% |
127.3 MB |
100.0 KB |
0 bytes |
2.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:SENTIEON_HAPLOTYPER (HCC1395_BL)
|
18s |
2s |
5s |
10s |
496.1 MB |
623% |
615.1 MB |
173.3 KB |
0 bytes |
6.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:SENTIEON_HAPLOTYPER (Sig_18_Blood)
|
15s |
2s |
2s |
10s |
360.2 MB |
444% |
139.0 MB |
98.2 KB |
0 bytes |
2.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:SENTIEON_HAPLOTYPER (Sig_18_Blood)
|
22s |
2s |
10s |
9s |
620.0 MB |
706% |
647.7 MB |
181.0 KB |
0 bytes |
6.2 MB |
1 |