succeeded NFCORE_SAREK:SAREK:FASTQ_ALIGN_BWAMEM_MEM2_DRAGMAP_SENTIEON:SENTIEON_BWAMEM (Sig_18_tissue;0009) 3m 44s 1m 21s 2m 10s 12s 64.3 GB 1279% 5.7 GB 505.5 MB 0 bytes 104.5 MB 1
succeeded NFCORE_SAREK:SAREK:FASTQ_ALIGN_BWAMEM_MEM2_DRAGMAP_SENTIEON:SENTIEON_BWAMEM (Sig_18_tissue;0010) 4m 0s 1m 21s 2m 27s 11s 64.4 GB 1288% 5.7 GB 504.3 MB 0 bytes 104.2 MB 1
succeeded NFCORE_SAREK:SAREK:FASTQ_ALIGN_BWAMEM_MEM2_DRAGMAP_SENTIEON:SENTIEON_BWAMEM (Sig_18_tissue;0011) 4m 10s 1m 21s 2m 37s 11s 64.4 GB 1295% 5.7 GB 504.3 MB 0 bytes 104.3 MB 1
succeeded NFCORE_SAREK:SAREK:FASTQ_ALIGN_BWAMEM_MEM2_DRAGMAP_SENTIEON:SENTIEON_BWAMEM (Sig_18_tissue;0012) 4m 4s 1m 2s 2m 48s 13s 64.4 GB 1295% 5.7 GB 504.9 MB 0 bytes 104.6 MB 1
succeeded NFCORE_SAREK:SAREK:FASTQ_ALIGN_BWAMEM_MEM2_DRAGMAP_SENTIEON:SENTIEON_BWAMEM (Sig_18_tissue;0013) 4m 11s 1m 21s 2m 38s 11s 64.4 GB 1288% 5.7 GB 504.4 MB 0 bytes 104.3 MB 1
succeeded NFCORE_SAREK:SAREK:FASTQ_ALIGN_BWAMEM_MEM2_DRAGMAP_SENTIEON:SENTIEON_BWAMEM (Sig_18_tissue;0014) 4m 13s 1m 21s 2m 40s 11s 64.3 GB 1290% 5.7 GB 504.5 MB 0 bytes 104.4 MB 1
succeeded NFCORE_SAREK:SAREK:FASTQC (HCC1395_BL-lane_1) 1m 26s 1m 13s 11s 2s 3.5 GB 195% 136.1 MB 4.5 MB 0 bytes 4.9 MB 1
succeeded NFCORE_SAREK:SAREK:FASTQC (HCC1395_tumor-lane_1) 1m 45s 1m 19s 24s 2s 3.1 GB 190% 344.0 MB 4.5 MB 0 bytes 4.8 MB 1
succeeded NFCORE_SAREK:SAREK:FASTQC (Sig_18_Blood-lane_1) 1m 33s 1m 19s 12s 2s 3.4 GB 195% 167.7 MB 4.5 MB 0 bytes 4.8 MB 1
succeeded NFCORE_SAREK:SAREK:FASTQC (Sig_18_tissue-lane_1) 2m 9s 1m 14s 52s 3s 2.8 GB 205% 772.1 MB 4.4 MB 0 bytes 4.7 MB 1
succeeded NFCORE_SAREK:SAREK:MULTIQC 1m 10s 3s 52s 14s 1.0 GB 101% 180.0 MB 127.3 MB 0 bytes 120.3 MB 1
succeeded NFCORE_SAREK:SAREK:TMB (HCC1395_tumor_vs_HCC1395_BL) 8s 7s 0s 0s 13.2 MB 106% 1.8 MB 740 bytes 0 bytes 12.0 KB 1
succeeded NFCORE_SAREK:SAREK:TMB (Sig_18_tissue_vs_Sig_18_Blood) 4s 3s 0s 0s 13.0 MB 94% 1.8 MB 834 bytes 0 bytes 12.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_BLACKLIST:BCFTOOLS_ANNOTATE (HCC1395_BL;haplotypecaller) 15s 13s - - 16.4 MB 9550% 219.5 KB 43.8 KB 0 bytes 52.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_BLACKLIST:BCFTOOLS_ANNOTATE (HCC1395_BL;manta) 5s 4s - - 17.8 MB 9246% 176.9 KB 19.8 KB 0 bytes 32.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_BLACKLIST:BCFTOOLS_ANNOTATE (HCC1395_BL;sentieon_haplotyper) 4s 2s - - 17.9 MB 9225% 216.5 KB 42.2 KB 0 bytes 52.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_BLACKLIST:BCFTOOLS_ANNOTATE (HCC1395_BL;strelka) 4s 2s - - 17.5 MB 8187% 200.2 KB 34.2 KB 0 bytes 44.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_BLACKLIST:BCFTOOLS_ANNOTATE (HCC1395_tumor_vs_HCC1395_BL;manta) 5s 3s - - 17.6 MB 7766% 176.4 KB 19.4 KB 0 bytes 32.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_BLACKLIST:BCFTOOLS_ANNOTATE (HCC1395_tumor_vs_HCC1395_BL;manta) 4s 2s - - 3.2 MB 9033% 177.0 KB 19.7 KB 0 bytes 32.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_BLACKLIST:BCFTOOLS_ANNOTATE (HCC1395_tumor_vs_HCC1395_BL;mutect2) 4s 2s - - 3.2 MB 6669% 193.7 KB 29.9 KB 0 bytes 44.0 KB 1
615 items found |
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