NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TIDDIT:SVDB_MERGE (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
SVDB_MERGE (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32)

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Task Info

Status: succeeded
Hash: 08c21c86493f
Process: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TIDDIT:SVDB_MERGE
Tag: 1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32
Attempts: 3

Attempt 3

Execution

Status: succeeded
Hash: 48/ad203b
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/mulled-v2-375a758a4ca8c128fb9d38047a68a9f4322d2acd:b3615e06ef17566f2988a215ce9e10808c1d08bf-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/48/ad203bcab74a4a7d8ad928db8b2f5e
Native ID: nf-48ad203bcab74a4a7d8ad928db8b2f5e-3fd2c

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 30.3 / 6
Memory (peak / alloc): 34.0 MB / 36.0 GB
Process I/O (rchar / wchar): 17.5 MB / 8.0 MB
Disk I/O (read / write): - / 688.0 KB
Host: i-0c21c1e25fd4429b6 ( spot)

Runtime

Submitted: Jan 27, 2026 5:30:33 PM
Completed: Jan 27, 2026 5:30:44 PM
Total Duration: 10s

Phases

Queue: 8s
Execution: 1s
Stage/Unstage: 1s

Attempt 2

Execution

Status: succeeded
Hash: 45/24fb86
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/mulled-v2-375a758a4ca8c128fb9d38047a68a9f4322d2acd:b3615e06ef17566f2988a215ce9e10808c1d08bf-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/45/24fb86510cf95f4cfcbe4091a1455e
Native ID: nf-4524fb86510cf95f4cfcbe4091a1455e-02ce4

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 24.3 / 6
Memory (peak / alloc): 26.9 MB / 36.0 GB
Process I/O (rchar / wchar): 15.2 MB / 5.7 MB
Disk I/O (read / write): - / 492.0 KB
Host: i-0ca18d70a2aca1548 ( spot)

Runtime

Submitted: Jan 27, 2026 3:56:57 PM
Completed: Jan 27, 2026 3:57:08 PM
Total Duration: 10s

Phases

Queue: 8s
Execution: -
Stage/Unstage: -

Attempt 1

Execution

Status: succeeded
Hash: f0/bce515
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/mulled-v2-375a758a4ca8c128fb9d38047a68a9f4322d2acd:b3615e06ef17566f2988a215ce9e10808c1d08bf-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f0/bce5159b96faed44ceea4f486df33a
Native ID: nf-f0bce5159b96faed44ceea4f486df33a-90c9a

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 17.2 / 6
Memory (peak / alloc): 33.5 MB / 36.0 GB
Process I/O (rchar / wchar): 13.6 MB / 4.1 MB
Disk I/O (read / write): - / 436.0 KB
Host: i-0b75f1c68bc526f43 ( spot)

Runtime

Submitted: Jan 27, 2026 2:52:38 AM
Completed: Jan 27, 2026 2:52:48 AM
Total Duration: 9s

Phases

Queue: 7s
Execution: 1s
Stage/Unstage: 1s