NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:CRAM_FILTER_HLA (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
CRAM_FILTER_HLA (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33)

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Task Info

Status: succeeded
Hash: 35ba46553da4
Process: NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:CRAM_FILTER_HLA
Tag: 1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33
Attempts: 3

Attempt 3

Execution

Status: succeeded
Hash: 55/1ccf3e
Exit Code: -
Container: community.wave.seqera.io/library/sambamba_samtools:0966924e22545fbe
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/55/1ccf3e85857bb8a81598d1e991e0f6
Native ID: nf-551ccf3e85857bb8a81598d1e991e0f6-b9c70

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 3.3 / 6
Memory (peak / alloc): 1.9 GB / 36.0 GB
Process I/O (rchar / wchar): 164.4 GB / 86.6 GB
Disk I/O (read / write): 79.9 GB / 4.0 GB
Host: i-0c0dc92ac076c3c84 ( spot)

Runtime

Submitted: Jan 27, 2026 4:24:35 PM
Completed: Jan 27, 2026 4:43:06 PM
Total Duration: 18m 30s

Phases

Queue: 1m 25s
Execution: 13m 21s
Stage/Unstage: 3m 43s

Attempt 2

Execution

Status: succeeded
Hash: 0e/28b059
Exit Code: -
Container: community.wave.seqera.io/library/sambamba_samtools:0966924e22545fbe
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0e/28b0596e6f8b53723301df0a98de33
Native ID: nf-0e28b0596e6f8b53723301df0a98de33-6ad5c

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 3.6 / 6
Memory (peak / alloc): 2.3 GB / 36.0 GB
Process I/O (rchar / wchar): 225.9 GB / 118.1 GB
Disk I/O (read / write): 112.1 GB / 4.6 GB
Host: i-0ca18d70a2aca1548 ( spot)

Runtime

Submitted: Jan 27, 2026 2:53:47 PM
Completed: Jan 27, 2026 3:15:51 PM
Total Duration: 22m 3s

Phases

Queue: 1m 19s
Execution: 16m 31s
Stage/Unstage: 4m 12s

Attempt 1

Execution

Status: succeeded
Hash: 7f/6399a2
Exit Code: -
Container: community.wave.seqera.io/library/sambamba_samtools:0966924e22545fbe
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7f/6399a2e30d83b97d6ea62465b96e09
Native ID: nf-7f6399a2e30d83b97d6ea62465b96e09-bf677

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 3.3 / 6
Memory (peak / alloc): 1.9 GB / 36.0 GB
Process I/O (rchar / wchar): 160.8 GB / 85.1 GB
Disk I/O (read / write): 77.5 GB / 3.9 GB
Host: i-029161b9dfefe2f24 ( spot)

Runtime

Submitted: Jan 27, 2026 2:20:18 AM
Completed: Jan 27, 2026 2:34:01 AM
Total Duration: 13m 42s

Phases

Queue: 7s
Execution: 10m 41s
Stage/Unstage: 2m 53s