NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:FASTQ_HLATYPING_OPTITYPE_CUSTOM:BAM_MERGE_INDEX_SAMTOOLS_R1:INDEX_MERGE_BAM (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
INDEX_MERGE_BAM (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32)

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Task Info

Status: succeeded
Hash: 710a7f5be68d
Process: NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:FASTQ_HLATYPING_OPTITYPE_CUSTOM:BAM_MERGE_INDEX_SAMTOOLS_R1:INDEX_MERGE_BAM
Tag: 1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 87/ec0ae4
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/87/ec0ae4afa69d0f271da4417240a960
Native ID: nf-87ec0ae4afa69d0f271da4417240a960-4f9cd

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.2 / 2
Memory (peak / alloc): 7.3 MB / 12.0 GB
Process I/O (rchar / wchar): 7.0 MB / 49.2 KB
Disk I/O (read / write): - / 52.0 KB
Host: i-033f15e2fde892b77 ( spot)

Runtime

Submitted: Jan 27, 2026 12:36:18 PM
Completed: Jan 27, 2026 12:36:23 PM
Total Duration: 4s

Phases

Queue: 3s
Execution: -
Stage/Unstage: -

Attempt 1

Execution

Status: succeeded
Hash: 25/3b617a
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/25/3b617a688b85b3241d4444b9464a9d
Native ID: nf-253b617a688b85b3241d4444b9464a9d-bf5b8

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.2 / 2
Memory (peak / alloc): 7.4 MB / 12.0 GB
Process I/O (rchar / wchar): 4.6 MB / 44.1 KB
Disk I/O (read / write): - / 44.0 KB
Host: i-0d5e404d894f99e06 ( spot)

Runtime

Submitted: Jan 26, 2026 9:41:17 PM
Completed: Jan 26, 2026 9:41:22 PM
Total Duration: 4s

Phases

Queue: 3s
Execution: -
Stage/Unstage: -