NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SCARHRD (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
SCARHRD (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32)

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Task Info

Status: succeeded
Hash: 951c94d7b70e
Process: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SCARHRD
Tag: 1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32
Attempts: 2

Attempt 2

Execution

Status: succeeded - cached
Hash: ec/80eccd
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/tempralla/skaar:0.6.2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ec/80eccdc19848c13451aaf0382fbd26
Native ID: nf-ec80eccdc19848c13451aaf0382fbd26-28849

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 7.4 / 2
Memory (peak / alloc): 345.7 MB / 12.0 GB
Process I/O (rchar / wchar): 41.9 MB / 37.3 KB
Disk I/O (read / write): - / 48.0 KB
Host: i-015ca7ef1c334fac7 ( spot)

Runtime

Submitted: Jan 27, 2026 5:44:22 PM
Completed: Jan 27, 2026 5:44:58 PM
Total Duration: 35s

Phases

Queue: 31s
Execution: 2s
Stage/Unstage: 1s

Attempt 1

Execution

Status: succeeded
Hash: c4/178c2f
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/tempralla/skaar:0.6.2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c4/178c2fd023f817b8e52a9fcccbd05e
Native ID: nf-c4178c2fd023f817b8e52a9fcccbd05e-ea868

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 7.1 / 2
Memory (peak / alloc): 341.3 MB / 12.0 GB
Process I/O (rchar / wchar): 41.9 MB / 44.1 KB
Disk I/O (read / write): - / 56.0 KB
Host: i-065022508eb6afa0f ( spot)

Runtime

Submitted: Jan 27, 2026 3:19:59 AM
Completed: Jan 27, 2026 3:20:31 AM
Total Duration: 31s

Phases

Queue: 27s
Execution: 2s
Stage/Unstage: 1s