NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:MERGEMUTECTSTATS (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
MERGEMUTECTSTATS (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32)

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Task Info

Status: succeeded
Hash: afa9a32cec6c
Process: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:MERGEMUTECTSTATS
Tag: 1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32
Attempts: 4

Attempt 4

Execution

Status: succeeded
Hash: a4/dbbc5b
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/gatk4:4.5.0.0--py36hdfd78af_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a4/dbbc5b3be2394b8757f5ee0cfb2c33
Native ID: nf-a4dbbc5b3be2394b8757f5ee0cfb2c33-76e54

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.6 / 2
Memory (peak / alloc): 254.8 MB / 8.0 GB
Process I/O (rchar / wchar): 95.0 MB / 703.2 KB
Disk I/O (read / write): - / 696.0 KB
Host: i-0ddd51277d9e76467 ( on-demand)

Runtime

Submitted: Jan 28, 2026 12:19:42 PM
Completed: Jan 28, 2026 12:19:58 PM
Total Duration: 15s

Phases

Queue: 2s
Execution: 2s
Stage/Unstage: 11s

Attempt 3

Execution

Status: succeeded - cached
Hash: f5/3d889a
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/gatk4:4.5.0.0--py36hdfd78af_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f5/3d889af0bba9416d83984b6cb1fcae
Native ID: nf-f53d889af0bba9416d83984b6cb1fcae-b7e32

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.8 / 2
Memory (peak / alloc): 267.8 MB / 8.0 GB
Process I/O (rchar / wchar): 95.1 MB / 703.2 KB
Disk I/O (read / write): - / 696.0 KB
Host: i-09ff0a345dc7df20c ( on-demand)

Runtime

Submitted: Jan 27, 2026 6:24:14 PM
Completed: Jan 27, 2026 6:24:30 PM
Total Duration: 15s

Phases

Queue: 2s
Execution: 2s
Stage/Unstage: 11s

Attempt 2

Execution

Status: succeeded
Hash: 65/f8078d
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/gatk4:4.5.0.0--py36hdfd78af_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/65/f8078de77d0d7d2b74f66ac41d4d9d
Native ID: nf-65f8078de77d0d7d2b74f66ac41d4d9d-1d45a

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.8 / 2
Memory (peak / alloc): 264.0 MB / 8.0 GB
Process I/O (rchar / wchar): 95.1 MB / 703.2 KB
Disk I/O (read / write): - / 696.0 KB
Host: i-05982ab731eda3b3e ( on-demand)

Runtime

Submitted: Jan 27, 2026 4:13:28 PM
Completed: Jan 27, 2026 4:13:45 PM
Total Duration: 16s

Phases

Queue: 3s
Execution: 3s
Stage/Unstage: 10s

Attempt 1

Execution

Status: succeeded
Hash: e6/3d6e34
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/gatk4:4.5.0.0--py36hdfd78af_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e6/3d6e348d12ba60b94ae26ac8d6ccd9
Native ID: nf-e63d6e348d12ba60b94ae26ac8d6ccd9-ca806

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 2.5 / 2
Memory (peak / alloc): 255.4 MB / 8.0 GB
Process I/O (rchar / wchar): 95.0 MB / 691.6 KB
Disk I/O (read / write): - / 696.0 KB
Host: i-06c3e66f26e9208da ( on-demand)

Runtime

Submitted: Jan 27, 2026 7:40:00 AM
Completed: Jan 27, 2026 7:40:07 AM
Total Duration: 6s

Phases

Queue: 2s
Execution: 2s
Stage/Unstage: 2s