NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:WHATSHAP_MUTECT2 (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
WHATSHAP_MUTECT2 (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32)

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Task Info

Status: aborted
Hash: b39f22c44981
Process: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:WHATSHAP_MUTECT2
Tag: 1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32
Attempts: 6

Attempt 6

Execution

Status: aborted
Hash: 38/43e220
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/whatshap:2.8--py39h2de1943_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/38/43e220a339c9cdd295fa67ee43919a
Native ID: nf-3843e220a339c9cdd295fa67ee43919a-112d5

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 8.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0ddd51277d9e76467 ( on-demand)

Runtime

Submitted: Jan 28, 2026 12:54:11 PM
Completed: Jan 28, 2026 2:11:14 PM
Total Duration: -

Phases

Queue: 9s
Execution: -
Stage/Unstage: -

Attempt 5

Execution

Status: succeeded
Hash: 80/765865
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/whatshap:2.8--py39h2de1943_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/80/7658656cfe863f25c1cc5101737d28
Native ID: nf-807658656cfe863f25c1cc5101737d28-3231f

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 4
Memory (peak / alloc): 10.6 GB / 16.0 GB
Process I/O (rchar / wchar): 84.0 GB / 34.0 MB
Disk I/O (read / write): 80.9 GB / 34.1 MB
Host: i-0308a25885fe8005b ( on-demand)

Runtime

Submitted: Jan 27, 2026 10:56:30 PM
Completed: Jan 28, 2026 2:44:43 AM
Total Duration: 3h 48m

Phases

Queue: 53s
Execution: 3h 43m
Stage/Unstage: 3m 21s

Attempt 4

Execution

Status: failed
Hash: ac/c2f493
Exit Code: 137
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/whatshap:2.8--py39h2de1943_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ac/c2f493e941ea32304e2b0b65b3ffbb
Native ID: nf-acc2f493e941ea32304e2b0b65b3ffbb-c006f

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 8.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-082ebdc7865442bc5 ( on-demand)

Runtime

Submitted: Jan 27, 2026 7:50:21 PM
Completed: Jan 27, 2026 10:56:24 PM
Total Duration: 3h 6m

Phases

Queue: 45s
Execution: 3h 5m
Stage/Unstage: 0s

Attempt 3

Execution

Status: aborted
Hash: 61/587334
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/whatshap:2.8--py39h2de1943_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/61/5873343e06c393d3ccc679f833ccfa
Native ID: nf-615873343e06c393d3ccc679f833ccfa-2f65e

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 8.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-09ff0a345dc7df20c ( on-demand)

Runtime

Submitted: Jan 27, 2026 6:58:03 PM
Completed: Jan 27, 2026 7:37:57 PM
Total Duration: -

Phases

Queue: 9s
Execution: -
Stage/Unstage: -

Attempt 2

Execution

Status: aborted
Hash: b1/a17299
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/whatshap:2.8--py39h2de1943_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b1/a17299d9cdd3863bf5aca446c02ce4
Native ID: nf-b1a17299d9cdd3863bf5aca446c02ce4-17f80

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 4
Memory (peak / alloc): - / 16.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-08f70e4870a2888eb ( on-demand)

Runtime

Submitted: Jan 27, 2026 10:11:19 AM
Completed: Jan 27, 2026 10:24:22 AM
Total Duration: -

Phases

Queue: 1m 9s
Execution: -
Stage/Unstage: -

Attempt 1

Execution

Status: failed
Hash: 30/bee6ca
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/whatshap:2.8--py39h2de1943_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/30/bee6ca4aeffbfb57413fcf79afe37a
Native ID: nf-30bee6ca4aeffbfb57413fcf79afe37a-f7f9c

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 8.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-06c3e66f26e9208da ( on-demand)

Runtime

Submitted: Jan 27, 2026 7:49:20 AM
Completed: Jan 27, 2026 10:11:19 AM
Total Duration: -

Phases

Queue: 19s
Execution: -
Stage/Unstage: -