NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:FASTQ_HLATYPING_OPTITYPE_CUSTOM:BAM_MERGE_INDEX_SAMTOOLS_R2:INDEX_MERGE_BAM (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
INDEX_MERGE_BAM (1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32)

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Task Info

Status: succeeded
Hash: b6b4a4772d76
Process: NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:FASTQ_HLATYPING_OPTITYPE_CUSTOM:BAM_MERGE_INDEX_SAMTOOLS_R2:INDEX_MERGE_BAM
Tag: 1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: ce/81205f
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ce/81205fe791393667d3be61563cb7d8
Native ID: nf-ce81205fe791393667d3be61563cb7d8-a7f48

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.2 / 2
Memory (peak / alloc): 7.3 MB / 12.0 GB
Process I/O (rchar / wchar): 7.4 MB / 48.6 KB
Disk I/O (read / write): - / 48.0 KB
Host: i-0e0baf431fdb487c1 ( spot)

Runtime

Submitted: Jan 27, 2026 12:36:17 PM
Completed: Jan 27, 2026 12:36:23 PM
Total Duration: 5s

Phases

Queue: 4s
Execution: -
Stage/Unstage: -

Attempt 1

Execution

Status: succeeded
Hash: d7/2591ab
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d7/2591ab08d9238a792104d0b31f91ab
Native ID: nf-d72591ab08d9238a792104d0b31f91ab-34741

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.2 / 2
Memory (peak / alloc): 7.3 MB / 12.0 GB
Process I/O (rchar / wchar): 4.6 MB / 43.9 KB
Disk I/O (read / write): - / 44.0 KB
Host: i-00ad7cfb3c88d0b04 ( spot)

Runtime

Submitted: Jan 26, 2026 9:41:17 PM
Completed: Jan 26, 2026 9:41:23 PM
Total Duration: 5s

Phases

Queue: 4s
Execution: -
Stage/Unstage: -