NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:FASTQ_HLATYPING_OPTITYPE_CUSTOM:BAM_MERGE_INDEX_SAMTOOLS_R1:INDEX_MERGE_BAM (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
INDEX_MERGE_BAM (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33)

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Task Info

Status: succeeded
Hash: ba0bab6d46fb
Process: NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:FASTQ_HLATYPING_OPTITYPE_CUSTOM:BAM_MERGE_INDEX_SAMTOOLS_R1:INDEX_MERGE_BAM
Tag: 1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 5b/7a2ff5
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5b/7a2ff509ebcbc637f4d18fbe9953eb
Native ID: nf-5b7a2ff509ebcbc637f4d18fbe9953eb-1d416

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.4 / 2
Memory (peak / alloc): 7.2 MB / 12.0 GB
Process I/O (rchar / wchar): 44.0 MB / 68.1 KB
Disk I/O (read / write): - / 68.0 KB
Host: i-0ed8dea3ccd31f222 ( spot)

Runtime

Submitted: Jan 27, 2026 3:17:30 PM
Completed: Jan 27, 2026 3:17:37 PM
Total Duration: 6s

Phases

Queue: 4s
Execution: -
Stage/Unstage: -

Attempt 1

Execution

Status: succeeded
Hash: 1a/dfcf7c
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/samtools:1.21--h50ea8bc_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1a/dfcf7c795d65db61b7cb9250f84e37
Native ID: nf-1adfcf7c795d65db61b7cb9250f84e37-e0fe2

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.5 / 2
Memory (peak / alloc): 7.2 MB / 12.0 GB
Process I/O (rchar / wchar): 29.9 MB / 63.7 KB
Disk I/O (read / write): - / 64.0 KB
Host: i-096ef805b2e2b00ee ( spot)

Runtime

Submitted: Jan 27, 2026 2:35:18 AM
Completed: Jan 27, 2026 2:35:24 AM
Total Duration: 5s

Phases

Queue: 3s
Execution: -
Stage/Unstage: -