NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TIDDIT:TIDDIT_NORMAL:TABIX_BGZIP_TIDDIT_SV (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;null) - mipeters-sarek-binpacking-14 - Workflow Tracker

Runs
mipeters-sar..npacking-14
Tasks
TABIX_BGZIP_TIDDIT_SV (1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;null)

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Task Info

Status: succeeded
Hash: df4266256089
Process: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TIDDIT:TIDDIT_NORMAL:TABIX_BGZIP_TIDDIT_SV
Tag: 1029_BICA-T1-TDNA-1_ABtest_SSF_signatera_tissue_33_vs_1029_BICA-N1-BDNA-1_ABtest_SSF_signatera_blood_32;null
Attempts: 3

Attempt 3

Execution

Status: succeeded
Hash: f7/bbca97
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f7/bbca9742618e7a357b946eab0c97ca
Native ID: nf-f7bbca9742618e7a357b946eab0c97ca-aaf06

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 3.3 MB / 1.0 GB
Process I/O (rchar / wchar): 738.0 KB / 118.0 KB
Disk I/O (read / write): - / 124.0 KB
Host: i-0871dc4d898f98e3a ( spot)

Runtime

Submitted: Jan 27, 2026 4:40:41 PM
Completed: Jan 27, 2026 4:40:53 PM
Total Duration: 11s

Phases

Queue: 10s
Execution: -
Stage/Unstage: -

Attempt 2

Execution

Status: succeeded
Hash: 62/082188
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/62/082188000b908c77516558880d27d5
Native ID: nf-62082188000b908c77516558880d27d5-5629b

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 0.8 / 1
Memory (peak / alloc): 3.3 MB / 1.0 GB
Process I/O (rchar / wchar): 566.8 KB / 78.1 KB
Disk I/O (read / write): - / 80.0 KB
Host: i-0675a2f490e8f1b97 ( spot)

Runtime

Submitted: Jan 27, 2026 3:10:57 PM
Completed: Jan 27, 2026 3:11:03 PM
Total Duration: 5s

Phases

Queue: 4s
Execution: -
Stage/Unstage: -

Attempt 1

Execution

Status: succeeded
Hash: 2c/ced357
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/htslib:1.20--h5efdd21_2
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2c/ced3575f4b13b62e648a4b317b819a
Native ID: nf-2cced3575f4b13b62e648a4b317b819a-6e92c

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 0.8 / 1
Memory (peak / alloc): 3.3 MB / 2.0 GB
Process I/O (rchar / wchar): 500.8 KB / 75.7 KB
Disk I/O (read / write): - / 80.0 KB
Host: i-0b75f1c68bc526f43 ( spot)

Runtime

Submitted: Jan 27, 2026 2:29:17 AM
Completed: Jan 27, 2026 2:29:23 AM
Total Duration: 5s

Phases

Queue: 3s
Execution: -
Stage/Unstage: -