Process Directives

Container
292967571998.dkr.ecr.us-west-2.amazonaws.com/quay/biocontainers/snpeff:5.1--hdfd78af_2
CPU / Memory
2 / 8.0 GB

Tasks

44 succeeded

CPU Usage(cores)

Peak Memory(GB)

rchar(MB)

wchar(MB)

read_bytes(B)

write_bytes(MB)

Total Duration(s)

Queue(s)

Execution(s)

Stage/Unstage(s)

Clear
succeeded 1029_BBCQ-N1-BDNA-1_2375WFLT3_s21;haplotypecaller 1m 5s 2s 1m 0s 3s 3.0 GB 206% 640.5 MB 18.7 MB 0 bytes 15.8 MB 1
succeeded 1029_BBCQ-N1-BDNA-1_2375WFLT3_s21;manta 59s 3s 54s 2s 3.2 GB 200% 574.2 MB 3.6 MB 0 bytes 780.0 KB 1
succeeded 1029_BBCQ-N1-BDNA-1_2375WFLT3_s21;sentieon_haplotyper 1m 6s 3s 1m 0s 3s 2.8 GB 203% 640.6 MB 19.1 MB 0 bytes 16.3 MB 1
succeeded 1029_BBCQ-N1-BDNA-1_2375WFLT3_s21;strelka 1m 15s 11s 1m 2s 2s 3.7 GB 214% 639.9 MB 15.5 MB 0 bytes 12.7 MB 1
succeeded 1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21_vs_1029_BBCQ-N1-BDNA-1_2375WFLT3_s21;manta 34s 3s 28s 3s 2.8 GB 271% 240.3 MB 3.2 MB 0 bytes 300.0 KB 1
succeeded 1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21_vs_1029_BBCQ-N1-BDNA-1_2375WFLT3_s21;manta 1m 5s 9s 53s 3s 2.7 GB 230% 564.5 MB 3.6 MB 0 bytes 788.0 KB 1
succeeded 1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21_vs_1029_BBCQ-N1-BDNA-1_2375WFLT3_s21;mutect2 1m 11s 9s 59s 3s 2.8 GB 208% 639.4 MB 6.4 MB 0 bytes 3.5 MB 1
succeeded 1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21_vs_1029_BBCQ-N1-BDNA-1_2375WFLT3_s21;mutect2 1m 5s 3s 59s 3s 2.8 GB 211% 639.4 MB 6.4 MB 0 bytes 3.5 MB 1
succeeded 1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21_vs_1029_BBCQ-N1-BDNA-1_2375WFLT3_s21;strelka 32s 4s 25s 3s 2.5 GB 333% 165.8 MB 16.4 MB 0 bytes 13.5 MB 1
succeeded 1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21_vs_1029_BBCQ-N1-BDNA-1_2375WFLT3_s21;strelka 1m 10s 9s 58s 3s 2.8 GB 194% 639.1 MB 4.3 MB 0 bytes 1.4 MB 1
succeeded 1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21_vs_1029_BBCQ-N1-BDNA-1_2375WFLT3_s21;tnseq 1m 15s 11s 1m 1s 3s 3.0 GB 207% 640.9 MB 18.4 MB 0 bytes 15.5 MB 1
succeeded 1029_BBS1-N1-BDNA-1_2375WFLT3_s23;haplotypecaller 1m 5s 2s 1m 1s 2s 2.8 GB 205% 640.5 MB 18.5 MB 0 bytes 15.7 MB 1
succeeded 1029_BBS1-N1-BDNA-1_2375WFLT3_s23;manta 58s 3s 52s 3s 2.8 GB 197% 561.9 MB 3.6 MB 0 bytes 732.0 KB 1
succeeded 1029_BBS1-N1-BDNA-1_2375WFLT3_s23;sentieon_haplotyper 1m 13s 9s 1m 1s 3s 2.9 GB 209% 640.5 MB 19.0 MB 0 bytes 16.1 MB 1
succeeded 1029_BBS1-N1-BDNA-1_2375WFLT3_s23;strelka 1m 7s 3s 1m 1s 3s 3.1 GB 209% 639.9 MB 15.6 MB 0 bytes 12.7 MB 1
succeeded 1029_BBS1-T1-TDNA-1_23FC2GLT4_s23_vs_1029_BBS1-N1-BDNA-1_2375WFLT3_s23;manta 1m 2s 3s 56s 3s 3.0 GB 184% 605.9 MB 3.6 MB 0 bytes 764.0 KB 1
succeeded 1029_BBS1-T1-TDNA-1_23FC2GLT4_s23_vs_1029_BBS1-N1-BDNA-1_2375WFLT3_s23;manta 40s 4s 33s 3s 3.6 GB 286% 291.3 MB 4.3 MB 0 bytes 1.4 MB 1
succeeded 1029_BBS1-T1-TDNA-1_23FC2GLT4_s23_vs_1029_BBS1-N1-BDNA-1_2375WFLT3_s23;mutect2 1m 12s 3s 1m 6s 3s 3.0 GB 364% 640.1 MB 10.9 MB 0 bytes 8.0 MB 1
succeeded 1029_BBS1-T1-TDNA-1_23FC2GLT4_s23_vs_1029_BBS1-N1-BDNA-1_2375WFLT3_s23;mutect2 1m 10s 2s 1m 5s 3s 3.0 GB 356% 640.1 MB 10.9 MB 0 bytes 8.0 MB 1
succeeded 1029_BBS1-T1-TDNA-1_23FC2GLT4_s23_vs_1029_BBS1-N1-BDNA-1_2375WFLT3_s23;strelka 29s 2s 25s 2s 2.8 GB 243% 165.6 MB 10.2 MB 0 bytes 7.3 MB 1
44 items found |
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