|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:SAMTOOLS_MPILEUP (1029_BBS1-N1-BDNA-1_2375WFLT3_s23;1029_BBS1-N1-BDNA-1_2375WFLT3_s23)
|
4m 49s |
4s |
3m 11s |
1m 34s |
481.7 MB |
100% |
39.8 GB |
16.3 MB |
39.8 GB |
16.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:SAMTOOLS_MPILEUP (1029_BBS1-N1-BDNA-1_2375WFLT3_s23;1029_BBS1-N1-BDNA-1_2375WFLT3_s23)
|
4m 36s |
4s |
3m 11s |
1m 21s |
481.5 MB |
100% |
39.8 GB |
15.7 MB |
39.6 GB |
15.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:SAMTOOLS_MPILEUP (1029_BG5-N1-BDNA-1_2375WFLT3_s29;1029_BG5-N1-BDNA-1_2375WFLT3_s29)
|
7m 2s |
4s |
4m 2s |
2m 56s |
482.1 MB |
100% |
49.7 GB |
19.0 MB |
49.7 GB |
19.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:SAMTOOLS_MPILEUP (1029_BG5-N1-BDNA-1_2375WFLT3_s29;1029_BG5-N1-BDNA-1_2375WFLT3_s29)
|
5m 40s |
4s |
3m 59s |
1m 37s |
479.0 MB |
100% |
49.6 GB |
9.9 MB |
49.4 GB |
9.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:SAMTOOLS_MPILEUP (1029_BG5-N1-BDNA-1_2375WFLT3_s29;1029_BG5-N1-BDNA-1_2375WFLT3_s29)
|
5m 41s |
4s |
4m 1s |
1m 36s |
482.1 MB |
100% |
49.7 GB |
18.5 MB |
49.7 GB |
18.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:SAMTOOLS_MPILEUP (1029_BG5-N1-BDNA-1_2375WFLT3_s29;1029_BG5-N1-BDNA-1_2375WFLT3_s29)
|
5m 41s |
4s |
4m 0s |
1m 37s |
482.1 MB |
100% |
49.7 GB |
17.9 MB |
49.7 GB |
17.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:SAMTOOLS_MPILEUP (1029_BICA-N1-BDNA-1_2375WFLT3_s32;1029_BICA-N1-BDNA-1_2375WFLT3_s32)
|
5m 20s |
5s |
3m 43s |
1m 32s |
478.4 MB |
100% |
46.7 GB |
8.3 MB |
46.8 GB |
8.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:SAMTOOLS_MPILEUP (1029_BICA-N1-BDNA-1_2375WFLT3_s32;1029_BICA-N1-BDNA-1_2375WFLT3_s32)
|
5m 26s |
5s |
3m 48s |
1m 33s |
482.4 MB |
100% |
47.1 GB |
17.3 MB |
46.8 GB |
17.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:SAMTOOLS_MPILEUP (1029_BICA-N1-BDNA-1_2375WFLT3_s32;1029_BICA-N1-BDNA-1_2375WFLT3_s32)
|
5m 25s |
5s |
3m 45s |
1m 35s |
483.6 MB |
100% |
47.1 GB |
19.8 MB |
46.8 GB |
19.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:SAMTOOLS_MPILEUP (1029_BICA-N1-BDNA-1_2375WFLT3_s32;1029_BICA-N1-BDNA-1_2375WFLT3_s32)
|
7m 10s |
3s |
3m 46s |
3m 21s |
483.7 MB |
100% |
47.1 GB |
20.2 MB |
47.1 GB |
20.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:TABIX_TABIX (1029_BBCQ-N1-BDNA-1_2375WFLT3_s21;haplotypecaller)
|
5s |
4s |
- |
- |
9.8 MB |
141% |
1.6 MB |
153.0 KB |
0 bytes |
156.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:TABIX_TABIX (1029_BBCQ-N1-BDNA-1_2375WFLT3_s21;manta)
|
3s |
2s |
- |
- |
3.3 MB |
58% |
126.9 KB |
7.9 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:TABIX_TABIX (1029_BBCQ-N1-BDNA-1_2375WFLT3_s21;sentieon_haplotyper)
|
4s |
3s |
- |
- |
9.5 MB |
123% |
1.6 MB |
153.4 KB |
0 bytes |
156.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:TABIX_TABIX (1029_BBCQ-N1-BDNA-1_2375WFLT3_s21;strelka)
|
5s |
3s |
- |
- |
9.6 MB |
92% |
975.8 KB |
145.8 KB |
0 bytes |
156.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:TABIX_TABIX (1029_BBS1-N1-BDNA-1_2375WFLT3_s23;haplotypecaller)
|
7s |
6s |
- |
- |
9.7 MB |
122% |
1.6 MB |
154.0 KB |
0 bytes |
156.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:TABIX_TABIX (1029_BBS1-N1-BDNA-1_2375WFLT3_s23;manta)
|
6s |
5s |
- |
- |
3.1 MB |
60% |
126.1 KB |
7.8 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:TABIX_TABIX (1029_BBS1-N1-BDNA-1_2375WFLT3_s23;sentieon_haplotyper)
|
4s |
3s |
- |
- |
10.0 MB |
138% |
1.6 MB |
154.4 KB |
0 bytes |
156.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:TABIX_TABIX (1029_BBS1-N1-BDNA-1_2375WFLT3_s23;strelka)
|
3s |
2s |
- |
- |
9.8 MB |
132% |
976.8 KB |
147.1 KB |
0 bytes |
148.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:TABIX_TABIX (1029_BG5-N1-BDNA-1_2375WFLT3_s29;haplotypecaller)
|
5s |
4s |
- |
- |
9.6 MB |
121% |
1.6 MB |
154.1 KB |
0 bytes |
156.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:VCF_ANNOTATE_INDEL_ENTROPY:TABIX_TABIX (1029_BG5-N1-BDNA-1_2375WFLT3_s29;manta)
|
4s |
3s |
- |
- |
3.3 MB |
56% |
127.9 KB |
7.9 KB |
0 bytes |
12.0 KB |
1 |