|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_SOMATIC:BCFTOOLS_NORM (1029_BG5-N1-BDNA-1_2375WFLT3_s29)
|
20s |
3s |
7s |
9s |
35.6 MB |
273% |
3.1 GB |
290.3 KB |
0 bytes |
300.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_SOMATIC:BCFTOOLS_NORM (1029_BICA-N1-BDNA-1_2375WFLT3_s32)
|
21s |
4s |
7s |
9s |
41.7 MB |
267% |
3.5 GB |
2.8 MB |
0 bytes |
2.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_SOMATIC:BCFTOOLS_SORT (1029_BBCQ-N1-BDNA-1_2375WFLT3_s21)
|
5s |
3s |
- |
- |
19.1 MB |
8434% |
1.8 MB |
1.8 MB |
0 bytes |
1.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_SOMATIC:BCFTOOLS_SORT (1029_BBS1-N1-BDNA-1_2375WFLT3_s23)
|
5s |
3s |
- |
- |
21.0 MB |
5135% |
5.7 MB |
5.6 MB |
0 bytes |
5.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_SOMATIC:BCFTOOLS_SORT (1029_BG5-N1-BDNA-1_2375WFLT3_s29)
|
5s |
4s |
- |
- |
20.2 MB |
9796% |
736.6 KB |
640.1 KB |
0 bytes |
648.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_SOMATIC:BCFTOOLS_SORT (1029_BICA-N1-BDNA-1_2375WFLT3_s32)
|
4s |
2s |
- |
- |
22.1 MB |
3135% |
10.1 MB |
10.1 MB |
0 bytes |
10.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TABIX_GERMLINE (1029_BBCQ-N1-BDNA-1_2375WFLT3_s21;haplotypecaller)
|
6s |
4s |
- |
- |
9.7 MB |
119% |
1.6 MB |
152.9 KB |
0 bytes |
156.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TABIX_GERMLINE (1029_BBS1-N1-BDNA-1_2375WFLT3_s23;haplotypecaller)
|
5s |
4s |
- |
- |
9.5 MB |
119% |
1.6 MB |
153.9 KB |
0 bytes |
156.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TABIX_GERMLINE (1029_BG5-N1-BDNA-1_2375WFLT3_s29;haplotypecaller)
|
4s |
2s |
- |
- |
9.5 MB |
120% |
1.6 MB |
154.0 KB |
0 bytes |
156.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TABIX_GERMLINE (1029_BICA-N1-BDNA-1_2375WFLT3_s32;haplotypecaller)
|
5s |
4s |
- |
- |
9.6 MB |
97% |
1.6 MB |
151.2 KB |
0 bytes |
156.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TABIX_SOMATIC (1029_BBCQ-N1-BDNA-1_2375WFLT3_s21;mutect2)
|
8s |
7s |
- |
- |
3.3 MB |
68% |
531.7 KB |
49.5 KB |
0 bytes |
52.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TABIX_SOMATIC (1029_BBS1-N1-BDNA-1_2375WFLT3_s23;mutect2)
|
4s |
2s |
- |
- |
3.2 MB |
97% |
1.4 MB |
47.0 KB |
0 bytes |
48.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TABIX_SOMATIC (1029_BG5-N1-BDNA-1_2375WFLT3_s29;mutect2)
|
4s |
3s |
- |
- |
3.3 MB |
132% |
226.2 KB |
17.8 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TABIX_SOMATIC (1029_BICA-N1-BDNA-1_2375WFLT3_s32;mutect2)
|
4s |
2s |
- |
- |
9.6 MB |
117% |
2.7 MB |
126.6 KB |
0 bytes |
128.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_BLACKLIST:BCFTOOLS_ANNOTATE (1029_BBCQ-N1-BDNA-1_2375WFLT3_s21;mutect2)
|
5s |
3s |
- |
- |
16.7 MB |
7926% |
1.3 MB |
653.6 KB |
0 bytes |
660.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_BLACKLIST:BCFTOOLS_ANNOTATE (1029_BBS1-N1-BDNA-1_2375WFLT3_s23;mutect2)
|
5s |
3s |
- |
- |
19.6 MB |
7918% |
1.2 MB |
585.1 KB |
0 bytes |
592.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_BLACKLIST:BCFTOOLS_ANNOTATE (1029_BG5-N1-BDNA-1_2375WFLT3_s29;mutect2)
|
4s |
3s |
- |
- |
18.5 MB |
7890% |
1.4 MB |
706.0 KB |
0 bytes |
712.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_BLACKLIST:BCFTOOLS_ANNOTATE (1029_BICA-N1-BDNA-1_2375WFLT3_s32;mutect2)
|
4s |
2s |
- |
- |
19.9 MB |
7989% |
1.3 MB |
665.4 KB |
0 bytes |
672.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_LOWDEPTH:BCFTOOLS_ANNOTATE (1029_BBCQ-N1-BDNA-1_2375WFLT3_s21;mutect2)
|
6s |
4s |
- |
- |
19.7 MB |
8194% |
1.4 MB |
655.4 KB |
0 bytes |
660.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_LOWDEPTH:BCFTOOLS_ANNOTATE (1029_BBS1-N1-BDNA-1_2375WFLT3_s23;mutect2)
|
4s |
2s |
- |
- |
18.7 MB |
8355% |
1.2 MB |
585.7 KB |
0 bytes |
592.0 KB |
1 |