|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (1029_BG5-N1-BDNA-1_2375WFLT3_s29;mutect2)
|
4s |
2s |
- |
- |
6.1 MB |
104% |
6.3 MB |
1.1 MB |
0 bytes |
1.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (1029_BICA-N1-BDNA-1_2375WFLT3_s32;mutect2)
|
4s |
2s |
- |
- |
6.2 MB |
110% |
6.0 MB |
1.0 MB |
0 bytes |
1.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_CHIP_PON (1029_BBCQ-N1-BDNA-1_2375WFLT3_s21)
|
22s |
17s |
3s |
1s |
386.8 MB |
380% |
22.4 MB |
3.0 MB |
0 bytes |
3.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_CHIP_PON (1029_BBS1-N1-BDNA-1_2375WFLT3_s23)
|
7s |
3s |
2s |
1s |
326.9 MB |
940% |
22.0 MB |
2.8 MB |
0 bytes |
2.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_CHIP_PON (1029_BG5-N1-BDNA-1_2375WFLT3_s29)
|
12s |
9s |
2s |
0s |
301.1 MB |
463% |
22.8 MB |
3.2 MB |
0 bytes |
3.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_CHIP_PON (1029_BICA-N1-BDNA-1_2375WFLT3_s32)
|
6s |
2s |
2s |
1s |
325.1 MB |
809% |
22.8 MB |
3.2 MB |
0 bytes |
3.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_GERMLINE (1029_BBCQ-N1-BDNA-1_2375WFLT3_s21)
|
23s |
18s |
2s |
2s |
114.4 MB |
318% |
18.6 MB |
3.0 MB |
0 bytes |
3.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_GERMLINE (1029_BBS1-N1-BDNA-1_2375WFLT3_s23)
|
13s |
10s |
1s |
1s |
27.7 MB |
642% |
18.0 MB |
2.7 MB |
0 bytes |
2.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_GERMLINE (1029_BG5-N1-BDNA-1_2375WFLT3_s29)
|
20s |
17s |
1s |
1s |
13.8 MB |
767% |
19.1 MB |
3.2 MB |
0 bytes |
3.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_GERMLINE (1029_BICA-N1-BDNA-1_2375WFLT3_s32)
|
20s |
16s |
1s |
2s |
43.4 MB |
849% |
18.8 MB |
3.1 MB |
0 bytes |
3.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_SOMATIC (1029_BBCQ-N1-BDNA-1_2375WFLT3_s21)
|
7s |
4s |
1s |
1s |
31.7 MB |
768% |
17.4 MB |
3.0 MB |
0 bytes |
3.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_SOMATIC (1029_BBS1-N1-BDNA-1_2375WFLT3_s23)
|
6s |
3s |
0s |
2s |
14.4 MB |
1712% |
17.9 MB |
2.8 MB |
0 bytes |
2.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_SOMATIC (1029_BG5-N1-BDNA-1_2375WFLT3_s29)
|
15s |
12s |
1s |
1s |
37.4 MB |
743% |
17.5 MB |
3.2 MB |
0 bytes |
3.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_SOMATIC (1029_BICA-N1-BDNA-1_2375WFLT3_s32)
|
6s |
3s |
1s |
1s |
40.9 MB |
1509% |
20.0 MB |
3.2 MB |
0 bytes |
3.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:ANNOTATE_VCF_READCOUNTS (1029_BBCQ-N1-BDNA-1_2375WFLT3_s21)
|
12s |
8s |
1s |
2s |
24.8 MB |
100% |
13.5 MB |
2.5 MB |
0 bytes |
2.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:ANNOTATE_VCF_READCOUNTS (1029_BBS1-N1-BDNA-1_2375WFLT3_s23)
|
18s |
15s |
0s |
2s |
11.9 MB |
101% |
12.9 MB |
2.3 MB |
0 bytes |
2.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:ANNOTATE_VCF_READCOUNTS (1029_BG5-N1-BDNA-1_2375WFLT3_s29)
|
28s |
26s |
0s |
1s |
12.6 MB |
101% |
14.3 MB |
2.7 MB |
0 bytes |
2.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:ANNOTATE_VCF_READCOUNTS (1029_BICA-N1-BDNA-1_2375WFLT3_s32)
|
11s |
8s |
0s |
2s |
12.2 MB |
100% |
14.4 MB |
2.6 MB |
0 bytes |
2.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:BAMREADCOUNT_BLOOD (1029_BBCQ-N1-BDNA-1_2375WFLT3_s21)
|
8m 17s |
6s |
6m 30s |
1m 41s |
265.5 MB |
100% |
26.4 GB |
3.1 MB |
5.4 GB |
3.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:BAMREADCOUNT_BLOOD (1029_BBS1-N1-BDNA-1_2375WFLT3_s23)
|
6m 55s |
6s |
4m 49s |
2m 0s |
263.4 MB |
100% |
20.7 GB |
2.7 MB |
4.2 GB |
3.0 MB |
1 |