NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (rna_s1221_S42) - rnapipeline_vcf_bgzip_test_amd64 - Workflow Tracker

Runs
rnapipeline_.._test_amd64
Tasks
GATK4_MARKDUPLICATES (rna_s1221_S42)

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Task Info

Status: succeeded
Hash: c5c376624027
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: rna_s1221_S42
Attempts: 1

Attempt 1

Execution

Status: succeeded - cached
Hash: a6/3fbe0f
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a6/3fbe0f1f7b0dcfe5511c05aa3a26ec
Native ID: nf-a63fbe0f1f7b0dcfe5511c05aa3a26ec-c39b9

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.6 / 2
Memory (peak / alloc): 36.8 GB / 74.0 GB
Process I/O (rchar / wchar): 1.9 GB / 1.0 GB
Disk I/O (read / write): - / 1.0 GB
Host: i-0eb80138f9c28e731 ( spot)

Runtime

Submitted: Jun 02, 2026 9:19:41 AM
Completed: Jun 02, 2026 9:22:15 AM
Total Duration: 2m 33s

Phases

Queue: 18s
Execution: 1m 57s
Stage/Unstage: 18s