NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:FASTQ_HLATYPING_OPTITYPE:OPTITYPE (1029_2LI-N1-BDNA-1_2375WFLT3_s08) - sarek-optitype-runtime-comparison-8a99ba01-resume2 - Workflow Tracker

Runs
sarek-optity..a01-resume2
Tasks
OPTITYPE (1029_2LI-N1-BDNA-1_2375WFLT3_s08)

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Task Info

Status: succeeded
Hash: 221540ff09cc
Process: NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:FASTQ_HLATYPING_OPTITYPE:OPTITYPE
Tag: 1029_2LI-N1-BDNA-1_2375WFLT3_s08
Attempts: 3

Attempt 3

Execution

Status: succeeded - cached
Hash: dd/2470a6
Exit Code: -
Container: quay.io/rsrivas9784/optitype:v3
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/dd/2470a6777257a83e1636bd52cd86c7
Native ID: nf-dd2470a6777257a83e1636bd52cd86c7-29333

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 4
Memory (peak / alloc): 3.4 GB / 64.0 GB
Process I/O (rchar / wchar): 574.8 MB / 6.9 MB
Disk I/O (read / write): - / 7.0 MB
Host: i-0ae3f40634f097075 ( on-demand)

Runtime

Submitted: Feb 06, 2026 12:36:55 PM
Completed: Feb 06, 2026 12:49:25 PM
Total Duration: 12m 29s

Phases

Queue: 1m 8s
Execution: 11m 16s
Stage/Unstage: 4s

Attempt 2

Execution

Status: succeeded - cached
Hash: d3/342f40
Exit Code: -
Container: quay.io/rsrivas9784/optitype:v3
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d3/342f40b0953e431bdedabf5d9ad5ff
Native ID: nf-d3342f40b0953e431bdedabf5d9ad5ff-695bf

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 4
Memory (peak / alloc): 3.3 GB / 64.0 GB
Process I/O (rchar / wchar): 562.3 MB / 6.6 MB
Disk I/O (read / write): - / 6.7 MB
Host: i-0ae3f40634f097075 ( on-demand)

Runtime

Submitted: Feb 06, 2026 12:36:55 PM
Completed: Feb 06, 2026 12:49:01 PM
Total Duration: 12m 5s

Phases

Queue: 1m 8s
Execution: 10m 52s
Stage/Unstage: 4s

Attempt 1

Execution

Status: succeeded
Hash: 24/6fbfa2
Exit Code: -
Container: quay.io/rsrivas9784/optitype:v3
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/24/6fbfa27ad09cf3094e459f2fbb903e
Native ID: nf-246fbfa27ad09cf3094e459f2fbb903e-dfcc2

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 4
Memory (peak / alloc): 7.2 GB / 64.0 GB
Process I/O (rchar / wchar): 663.2 MB / 36.3 MB
Disk I/O (read / write): - / 36.4 MB
Host: i-0242ac28d7e19dcfd ( on-demand)

Runtime

Submitted: Feb 06, 2026 12:37:55 PM
Completed: Feb 06, 2026 1:04:38 PM
Total Duration: 26m 42s

Phases

Queue: 1m 5s
Execution: 25m 33s
Stage/Unstage: 3s