NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:FASTQ_HLATYPING_OPTITYPE:OPTITYPE (1029_05O-N1-BDNA-1_2375WFLT3_s02) - sarek-optitype-runtime-comparison-8a99ba01-resume2 - Workflow Tracker

Runs
sarek-optity..a01-resume2
Tasks
OPTITYPE (1029_05O-N1-BDNA-1_2375WFLT3_s02)

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Task Info

Status: succeeded
Hash: 5c2bd8ec838f
Process: NFCORE_SAREK:SAREK:CRAM_HLATYPING_ALL:FASTQ_HLATYPING_OPTITYPE:OPTITYPE
Tag: 1029_05O-N1-BDNA-1_2375WFLT3_s02
Attempts: 3

Attempt 3

Execution

Status: succeeded - cached
Hash: 2f/077862
Exit Code: -
Container: quay.io/rsrivas9784/optitype:v3
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2f/0778624feb6e1d2c5fffabab3cc6c2
Native ID: nf-2f0778624feb6e1d2c5fffabab3cc6c2-fc0a2

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 4
Memory (peak / alloc): 11.1 GB / 64.0 GB
Process I/O (rchar / wchar): 686.0 MB / 57.8 MB
Disk I/O (read / write): - / 57.9 MB
Host: i-0d9142848d611c7fb ( on-demand)

Runtime

Submitted: Feb 06, 2026 12:37:54 PM
Completed: Feb 06, 2026 1:18:03 PM
Total Duration: 40m 8s

Phases

Queue: 1m 0s
Execution: 39m 4s
Stage/Unstage: 3s

Attempt 2

Execution

Status: succeeded - cached
Hash: c3/395085
Exit Code: -
Container: quay.io/rsrivas9784/optitype:v3
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c3/395085a2188c2cc8d3f63b03b62ff0
Native ID: nf-c3395085a2188c2cc8d3f63b03b62ff0-c62f6

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.1 / 4
Memory (peak / alloc): 11.9 GB / 64.0 GB
Process I/O (rchar / wchar): 695.8 MB / 79.4 MB
Disk I/O (read / write): - / 79.5 MB
Host: i-0242ac28d7e19dcfd ( on-demand)

Runtime

Submitted: Feb 06, 2026 12:37:54 PM
Completed: Feb 06, 2026 1:23:11 PM
Total Duration: 45m 16s

Phases

Queue: 1m 6s
Execution: 44m 6s
Stage/Unstage: 3s

Attempt 1

Execution

Status: aborted
Hash: 0d/f964c3
Exit Code: -
Container: quay.io/rsrivas9784/optitype:v3
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0d/f964c35a684c5228794212d1ea5c47
Native ID: nf-0df964c35a684c5228794212d1ea5c47-3e216

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 4
Memory (peak / alloc): - / 64.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0242ac28d7e19dcfd ( on-demand)

Runtime

Submitted: Feb 06, 2026 12:38:51 PM
Completed: Feb 06, 2026 2:38:37 PM
Total Duration: -

Phases

Queue: 1m 1s
Execution: -
Stage/Unstage: -