.command.err - Workdir - NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:DIFF_DV_SENTIEON (659_bTo-N1-BDNA-1_B23KFG5LT4_1)

File Info

Filename: .command.err
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/27/e25d5df774528bd0ee3cd418fea5bf/.command.err
Size: 305 bytes
Task: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:DIFF_DV_SENTIEON (659_bTo-N1-BDNA-1_B23KFG5LT4_1)
Attempt

Content

INFO: Loading Sentieon variant positions...
INFO:   30947 variant positions in Sentieon VCF
INFO: Scanning DeepVariant VCF for novel INDEL positions...
INFO:   123 PASS INDELs in DeepVariant VCF
INFO:   3 novel positions (not in Sentieon) -> written to 659_bTo-N1-BDNA-1_B23KFG5LT4_1.dv_only_sites.vcf.gz