Prefix: s3://pltf-dev-user-bsmiljanic/PIPE-00017/sarek_vc_omics_bams/output
Path
/tracker.yml May 11, 2026 8:41 AM
/multiqc/multiqc_plots May 11, 2026 8:40 AM
/multiqc/multiqc_data May 11, 2026 8:40 AM
/multiqc/multiqc_report.html May 11, 2026 8:40 AM
/annotation/mutect2/659_bTo_pair/659_bTo_pair.mutect2.filtered_custom.ann_snpEff_VEP.ann.vcf.gz.tbi May 11, 2026 8:39 AM
/annotation/mutect2/659_bTo_pair/659_bTo_pair.mutect2.filtered_custom.ann_snpEff_VEP.ann.vcf.gz May 11, 2026 8:38 AM
/reports/EnsemblVEP/mutect2/659_bTo_pair/659_bTo_pair.mutect2.filtered_custom.ann_snpEff_VEP.ann.summary.html May 11, 2026 8:38 AM
/annotation/mutect2/659_bTo_pair/659_bTo_pair.mutect2.filtered_custom.ann_snpEff.ann.vcf.gz May 11, 2026 8:36 AM
/annotation/mutect2/659_bTo_pair/659_bTo_pair.mutect2.filtered_custom.ann_snpEff.ann.vcf.gz.tbi May 11, 2026 8:36 AM
/reports/raw_qc/snpeff/mutect2/659_bTo_pair/659_bTo_pair.mutect2.filtered_custom.ann_snpEff.genes.txt May 11, 2026 8:35 AM
/variant_calling/chip_variants/659_bTo-N1-BDNA-1_B23KFG5LT4_1/659_bTo-N1-BDNA-1_B23KFG5LT4_1.chip_candidates.vcf.gz May 11, 2026 8:35 AM
/reports/raw_qc/snpeff/mutect2/659_bTo_pair/snpEff_summary.html May 11, 2026 8:35 AM
/variant_calling/chip_variants/659_bTo-N1-BDNA-1_B23KFG5LT4_1/659_bTo-N1-BDNA-1_B23KFG5LT4_1.chip_candidates.vcf.gz.tbi May 11, 2026 8:35 AM
/reports/raw_qc/snpeff/mutect2/659_bTo_pair/659_bTo_pair.mutect2.filtered_custom.ann_snpEff.csv May 11, 2026 8:35 AM
/reports/variant_qc.csv May 11, 2026 8:33 AM
/reports/variant_qc.json May 11, 2026 8:32 AM
/reports/raw_qc/vcftools/mutect2/659_bTo_pair/659_bTo_pair.mutect2.filtered.FILTER.summary May 11, 2026 8:31 AM
/reports/raw_qc/vcftools/mutect2/659_bTo_pair/659_bTo_pair.mutect2.filtered.TsTv.count May 11, 2026 8:31 AM
/reports/raw_qc/vcftools/mutect2/659_bTo_pair/659_bTo_pair.mutect2.filtered.TsTv.qual May 11, 2026 8:31 AM
/reports/raw_qc/bcftools/mutect2/659_bTo_pair/659_bTo_pair.mutect2.filtered.bcftools_stats.txt May 11, 2026 8:31 AM
333 items found |