succeeded NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA (rna_s1221_S42) 1m 30s 33s 37s 20s 4.1 GB 100% 4.3 GB 596.0 KB 0 bytes 592.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:SAMTOOLS_INDEX_FOR_ARRIBA (rna_s1221_S42) 10s 8s - - 3.2 MB 64% 5.8 MB 5.5 KB 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:SAMTOOLS_SORT_FOR_ARRIBA (rna_s1221_S42) 1m 22s 1m 18s 1s 3s 21.9 MB 294% 68.3 MB 11.6 MB 0 bytes 11.6 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:SAMTOOLS_VIEW_FOR_ARRIBA (rna_s1221_S42) 1m 6s 3s 46s 17s 1.5 GB 226% 2.9 GB 5.7 MB 0 bytes 5.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:STAR_FOR_ARRIBA (rna_s1221_S42) 4m 38s 5s 2m 7s 2m 26s 32.0 GB 114% 30.0 GB 184.9 MB 3.8 GB 184.9 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:CANCER_INTRONS_TO_VCF (rna_s1221_S42) 11s 9s - - 13.1 MB 101% 1.1 MB 3.0 KB 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:CONTAMINATION_TO_MULTIQC (rna_s1221_S42) 6s 5s 0s 0s 13.3 MB 107% 1.1 MB 1.0 KB 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:CTATSPLICING_STARTOCANCERINTRONS (rna_s1221_S42) 2m 30s 49s 4s 1m 36s 485.5 MB 338% 71.2 MB 2.0 MB 58.0 MB 2.0 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1221_S42) 15s 10s 4s 1s 634.8 MB 202% 24.1 MB 4.2 MB 0 bytes 4.5 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:AGAT_CONVERTSPGFF2TSV (rna_s1221_S42) 18s 15s 2s 1s 60.1 MB 100% 7.8 MB 156.6 KB 0 bytes 156.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:ARRIBA_VISUALISATION (rna_s1221_S42) 45s 29s 5s 11s 495.0 MB 357% 30.9 MB 16.3 KB 0 bytes 20.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:FUSIONINSPECTOR (rna_s1221_S42) 8m 40s 18s 6m 34s 1m 47s 35.8 GB 101% 29.4 GB 55.9 MB 642.2 MB 23.1 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (rna_s1221_S42) 10s 6s 1s 3s 13.9 MB 1381% 31.0 MB 4.6 KB 0 bytes 20.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (rna_s1221_S42) 14s 10s 1s 2s 30.8 MB 932% 50.3 MB 3.8 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:GTF2BED (ref_annot.gtf) 37s 4s 21s 12s 3.2 GB 101% 1.3 GB 27.7 MB 0 bytes 27.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_INDEX (Homo_sapiens.GRCh38.102.cdna.all.fa.gz) 6m 16s 40s 5m 30s 6s 2.7 GB 100% 1.7 GB 605.9 MB 0 bytes 606.0 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_QUANT (rna_s1221_S42) 23s 3s 14s 6s 1.3 GB 196% 357.6 MB 8.5 MB 0 bytes 8.5 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (rna_s1221_S42) 7s 6s 0s 0s 14.6 MB 2867% 4.6 MB 3.4 KB 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_TX2GENE_QC (rna_s1221_S42) 13s 9s 1s 3s 199.2 MB 463% 43.6 MB 1.2 MB 0 bytes 1.2 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:MULTIQC 23s 16s 3s 3s 114.3 MB 768% 71.0 MB 22.6 MB 0 bytes 22.8 MB 1
47 items found |