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succeeded
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NFCORE_RNAFUSION:RNAFUSION:MULTIQC_GENERAL_STATS_TXT_TO_JSON (multiqc_data)
|
4s |
2s |
0s |
1s |
13.0 MB |
123% |
1.1 MB |
29.2 KB |
0 bytes |
36.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_BAMSTAT (rna_s1221_S42)
|
33s |
30s |
2s |
1s |
49.2 MB |
752% |
32.4 MB |
1.2 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_INFEREXPERIMENT (rna_s1221_S42)
|
49s |
45s |
3s |
1s |
72.0 MB |
573% |
60.1 MB |
710 bytes |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_INNERDISTANCE (rna_s1221_S42)
|
1m 5s |
55s |
8s |
2s |
786.0 MB |
458% |
93.7 MB |
5.7 MB |
0 bytes |
5.8 MB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_JUNCTIONANNOTATION (rna_s1221_S42)
|
52s |
45s |
4s |
3s |
111.4 MB |
530% |
68.7 MB |
11.0 MB |
0 bytes |
11.0 MB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_JUNCTIONSATURATION (rna_s1221_S42)
|
1m 1s |
55s |
4s |
2s |
96.1 MB |
876% |
66.0 MB |
27.4 KB |
0 bytes |
40.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDISTRIBUTION (rna_s1221_S42)
|
1m 27s |
55s |
30s |
2s |
1.1 GB |
157% |
309.5 MB |
1.6 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDUPLICATION (rna_s1221_S42)
|
50s |
46s |
3s |
1s |
78.8 MB |
838% |
38.3 MB |
13.7 KB |
0 bytes |
36.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (rna_s1221_S42)
|
56s |
23s |
20s |
13s |
20.2 GB |
187% |
117.7 MB |
19.5 MB |
0 bytes |
19.6 MB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PICARD_COLLECTINSERTSIZEMETRICS (rna_s1221_S42)
|
27s |
22s |
2s |
3s |
142.5 MB |
699% |
52.9 MB |
927.9 KB |
0 bytes |
940.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PICARD_COLLECTRNASEQMETRICS (rna_s1221_S42)
|
1m 15s |
1m 3s |
7s |
5s |
1.6 GB |
216% |
82.5 MB |
709.8 KB |
0 bytes |
700.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_LCEXTRAP (rna_s1221_S42)
|
8s |
5s |
1s |
2s |
10.0 MB |
101% |
14.0 MB |
459.7 KB |
0 bytes |
468.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_TO_MULTIQC (rna_s1221_S42)
|
7s |
6s |
0s |
0s |
13.6 MB |
96% |
1.5 MB |
1.1 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_QC (rna_s1221_S42)
|
3m 58s |
49s |
2m 46s |
22s |
5.1 GB |
158% |
7.8 GB |
716.3 MB |
1.2 GB |
85.4 MB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_TO_MULTIQC (rna_s1221_S42)
|
5s |
3s |
0s |
1s |
13.8 MB |
3482% |
4.1 MB |
3.2 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (rna_s1221_S42)
|
51s |
49s |
0s |
1s |
12.8 MB |
101% |
14.4 MB |
36.1 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:EXTRACT_VAF_FEATURES (rna_s1221_S42)
|
6s |
5s |
0s |
0s |
13.0 MB |
4190% |
4.7 MB |
684 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:NGSCheckMATE (rna_s1221_S42)
|
1m 11s |
33s |
27s |
11s |
3.3 MB |
146% |
5.8 GB |
749.2 KB |
0 bytes |
352.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:PREDICT_CONTAMINATION (rna_s1221_S42)
|
5s |
3s |
0s |
1s |
15.3 MB |
95% |
947.0 KB |
882 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:SAMTOOLS_INDEX_FOR_STARFUSION_CRAM (rna_s1221_S42)
|
8s |
7s |
- |
- |
3.2 MB |
89% |
3.1 MB |
5.6 KB |
0 bytes |
12.0 KB |
1 |