|
aborted
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_JUNCTIONSATURATION (rna_s1221_S42)
|
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
1 |
|
aborted
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDISTRIBUTION (rna_s1221_S42)
|
- |
9s |
- |
- |
- |
- |
- |
- |
- |
- |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDUPLICATION (rna_s1221_S42)
|
6s |
2s |
2s |
2s |
90.6 MB |
1269% |
38.3 MB |
13.7 KB |
0 bytes |
36.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (rna_s1221_S42)
|
36s |
15s |
13s |
8s |
22.0 GB |
204% |
117.8 MB |
19.5 MB |
0 bytes |
19.6 MB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PICARD_COLLECTINSERTSIZEMETRICS (rna_s1221_S42)
|
8s |
3s |
2s |
3s |
263.7 MB |
974% |
53.0 MB |
927.9 KB |
0 bytes |
940.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PICARD_COLLECTRNASEQMETRICS (rna_s1221_S42)
|
15s |
3s |
9s |
3s |
1.9 GB |
209% |
82.5 MB |
709.8 KB |
12.0 KB |
700.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_LCEXTRAP (rna_s1221_S42)
|
7s |
3s |
2s |
2s |
9.6 MB |
101% |
14.0 MB |
459.7 KB |
0 bytes |
468.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_TO_MULTIQC (rna_s1221_S42)
|
4s |
2s |
0s |
1s |
14.1 MB |
98% |
1.5 MB |
1.2 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_QC (rna_s1221_S42)
|
2m 56s |
30s |
2m 8s |
17s |
4.0 GB |
229% |
7.8 GB |
716.3 MB |
1.0 GB |
85.4 MB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_TO_MULTIQC (rna_s1221_S42)
|
4s |
3s |
0s |
0s |
14.1 MB |
3501% |
4.1 MB |
3.2 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (rna_s1221_S42)
|
32s |
30s |
0s |
1s |
12.5 MB |
100% |
14.4 MB |
36.2 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:EXTRACT_VAF_FEATURES (rna_s1221_S42)
|
5s |
4s |
0s |
0s |
14.6 MB |
3241% |
4.7 MB |
700 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:NGSCheckMATE (rna_s1221_S42)
|
32s |
2s |
22s |
8s |
3.2 MB |
207% |
5.8 GB |
749.2 KB |
0 bytes |
352.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:PREDICT_CONTAMINATION (rna_s1221_S42)
|
4s |
3s |
0s |
0s |
16.5 MB |
101% |
914.3 KB |
899 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:SAMTOOLS_INDEX_FOR_STARFUSION_CRAM (rna_s1221_S42)
|
4s |
3s |
- |
- |
3.1 MB |
95% |
3.1 MB |
5.6 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:SAMTOOLS_INDEX_FOR_STARFUSION (rna_s1221_S42)
|
5s |
3s |
- |
- |
9.8 MB |
258% |
14.0 MB |
1.6 MB |
0 bytes |
1.6 MB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:SAMTOOLS_VIEW_FOR_STARFUSION (rna_s1221_S42)
|
36s |
4s |
24s |
8s |
248.1 MB |
123% |
8.8 GB |
3.0 MB |
0 bytes |
3.0 MB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STAR_FOR_STARFUSION (rna_s1221_S42)
|
5m 42s |
3s |
4m 4s |
1m 35s |
38.8 GB |
108% |
30.9 GB |
250.2 MB |
7.2 GB |
249.0 MB |
1 |
|
aborted
|
NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION_FILTER (rna_s1221_S42)
|
- |
5s |
- |
- |
- |
- |
- |
- |
- |
- |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION (rna_s1221_S42)
|
1m 39s |
21s |
10s |
1m 7s |
5.7 GB |
398% |
444.4 MB |
5.9 MB |
68.6 MB |
5.9 MB |
1 |