|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_BAMSTAT (rna_s1221_S42)
|
1m 10s |
12s |
55s |
3s |
47.1 MB |
121% |
939.2 MB |
1.3 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_INFEREXPERIMENT (rna_s1221_S42)
|
17s |
11s |
2s |
4s |
71.7 MB |
555% |
55.5 MB |
815 bytes |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_INNERDISTANCE (rna_s1221_S42)
|
52s |
12s |
35s |
5s |
915.8 MB |
150% |
169.7 MB |
60.4 MB |
0 bytes |
60.5 MB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_JUNCTIONANNOTATION (rna_s1221_S42)
|
1m 8s |
11s |
53s |
4s |
137.0 MB |
125% |
985.7 MB |
51.6 MB |
0 bytes |
51.6 MB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_JUNCTIONSATURATION (rna_s1221_S42)
|
1m 33s |
13s |
1m 16s |
4s |
1.0 GB |
140% |
972.8 MB |
28.0 KB |
0 bytes |
40.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDISTRIBUTION (rna_s1221_S42)
|
1m 57s |
12s |
1m 40s |
5s |
1.1 GB |
111% |
1.2 GB |
1.7 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDUPLICATION (rna_s1221_S42)
|
1m 33s |
11s |
1m 18s |
4s |
3.3 GB |
122% |
945.2 MB |
150.9 KB |
0 bytes |
164.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (rna_s1221_S42)
|
2m 37s |
22s |
1m 52s |
23s |
32.5 GB |
171% |
1.9 GB |
1.0 GB |
0 bytes |
1.0 GB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PICARD_COLLECTINSERTSIZEMETRICS (rna_s1221_S42)
|
49s |
17s |
27s |
5s |
665.9 MB |
204% |
953.0 MB |
944.8 KB |
0 bytes |
952.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PICARD_COLLECTRNASEQMETRICS (rna_s1221_S42)
|
8m 2s |
16s |
7m 41s |
5s |
3.0 GB |
108% |
988.7 MB |
713.8 KB |
0 bytes |
700.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_LCEXTRAP (rna_s1221_S42)
|
2m 8s |
3s |
2m 0s |
5s |
189.1 MB |
100% |
920.3 MB |
453.3 KB |
0 bytes |
460.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_TO_MULTIQC (rna_s1221_S42)
|
6s |
5s |
0s |
0s |
12.5 MB |
118% |
1.5 MB |
1.1 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_QC (rna_s1221_S42)
|
4m 9s |
33s |
3m 10s |
25s |
4.0 GB |
117% |
10.3 GB |
698.4 MB |
1.8 GB |
83.2 MB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_TO_MULTIQC (rna_s1221_S42)
|
8s |
6s |
0s |
1s |
13.7 MB |
4335% |
4.1 MB |
3.2 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (rna_s1221_S42)
|
38s |
33s |
0s |
4s |
11.6 MB |
100% |
36.6 MB |
2.7 MB |
0 bytes |
2.7 MB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:EXTRACT_VAF_FEATURES (rna_s1221_S42)
|
6s |
5s |
0s |
0s |
12.7 MB |
1910% |
5.8 MB |
691 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:NGSCheckMATE (rna_s1221_S42)
|
2m 9s |
14s |
1m 46s |
9s |
3.3 MB |
123% |
6.7 GB |
3.0 MB |
0 bytes |
1.4 MB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:PREDICT_CONTAMINATION (rna_s1221_S42)
|
15s |
13s |
0s |
1s |
13.6 MB |
110% |
912.9 KB |
869 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:SEQTK_SAMPLE (rna_s1221_S42)
|
10m 53s |
3s |
10m 44s |
6s |
905.8 MB |
106% |
9.2 GB |
8.0 GB |
0 bytes |
1.1 GB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:SAMTOOLS_INDEX_FOR_STARFUSION_CRAM (rna_s1221_S42)
|
6s |
4s |
- |
- |
7.5 MB |
99% |
274.5 MB |
44.8 KB |
0 bytes |
48.0 KB |
1 |