succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (HCC1395_BL) 54s 40s 3s 10s 619.5 MB 299% 147.5 MB 1.3 MB 0 bytes 1.4 MB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (HCC1395_tumor) 58s 41s 5s 11s 605.0 MB 247% 183.0 MB 2.2 MB 0 bytes 2.2 MB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (Sig_18_Blood) 55s 41s 4s 9s 456.8 MB 267% 157.5 MB 1.5 MB 0 bytes 1.6 MB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (Sig_18_tissue) 59s 42s 6s 10s 615.6 MB 191% 260.0 MB 4.5 MB 3.8 MB 4.5 MB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (HCC1395_BL;SNP_GRCh38_hg38_wChr) 27s 4s 14s 9s 494.6 MB 320% 4.1 GB 832.8 KB 0 bytes 212.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (HCC1395_tumor;SNP_GRCh38_hg38_wChr) 27s 2s 16s 9s 498.1 MB 359% 4.5 GB 847.2 KB 0 bytes 216.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (Sig_18_Blood;SNP_GRCh38_hg38_wChr) 26s 4s 13s 9s 417.3 MB 343% 3.9 GB 830.3 KB 0 bytes 212.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:BAM_NGSCHECKMATE:BCFTOOLS_MPILEUP (Sig_18_tissue;SNP_GRCh38_hg38_wChr) 30s 3s 18s 9s 498.6 MB 269% 4.8 GB 851.1 KB 26.8 MB 216.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:BAM_NGSCHECKMATE:NGSCHECKMATE_NCM (1) 36s 26s - - 3.2 MB 2508% 12.1 MB 859.2 KB 0 bytes 904.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:MOSDEPTH (HCC1395_BL) 35s 3s 23s 9s 2.8 GB 107% 167.0 MB 6.1 MB 155.4 MB 6.2 MB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:MOSDEPTH (HCC1395_tumor) 35s 3s 22s 10s 1.9 GB 114% 333.5 MB 9.7 MB 317.8 MB 9.7 MB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:MOSDEPTH (Sig_18_Blood) 36s 5s 22s 9s 1.9 GB 109% 213.4 MB 7.4 MB 199.1 MB 7.4 MB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:MOSDEPTH (Sig_18_tissue) 39s 3s 27s 9s 1.9 GB 126% 720.7 MB 14.8 MB 694.5 MB 14.9 MB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:SAMTOOLS_STATS (HCC1395_BL) 17s 4s 4s 9s 9.1 MB 126% 155.6 MB 125.8 KB 0 bytes 128.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:SAMTOOLS_STATS (HCC1395_tumor) 22s 4s 9s 9s 9.0 MB 124% 318.0 MB 131.5 KB 0 bytes 132.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:SAMTOOLS_STATS (Sig_18_Blood) 17s 3s 5s 9s 9.1 MB 127% 199.3 MB 128.0 KB 0 bytes 128.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:SAMTOOLS_STATS (Sig_18_tissue) 32s 3s 20s 9s 9.2 MB 125% 694.7 MB 132.8 KB 0 bytes 132.0 KB 1
succeeded NFCORE_SAREK:SAREK:GENERATE_CHIP_REPORT (HCC1395_BL) 46s 40s 0s 5s 13.5 MB 261% 11.1 MB 21.5 KB 0 bytes 32.0 KB 1
succeeded NFCORE_SAREK:SAREK:GENERATE_CHIP_REPORT (Sig_18_Blood) 13s 11s 0s 1s 14.8 MB 949% 11.1 MB 21.6 KB 0 bytes 32.0 KB 1
succeeded NFCORE_SAREK:SAREK:MULTIQC 1m 16s 41s 23s 11s 1016.1 MB 36% 84.1 MB 25.0 MB 0 bytes 24.5 MB 1
328 items found |
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