|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA:MANTA_SOMATIC (custom_Sig_18_tumor_normal)
|
1m 37s |
5s |
1m 21s |
11s |
294.6 MB |
206% |
9.4 GB |
3.0 GB |
830.8 MB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA:MANTA_SOMATIC (HCC1395_tumor_vs_HCC1395_BL)
|
49s |
4s |
36s |
9s |
62.1 MB |
186% |
6.7 GB |
3.0 GB |
220.0 MB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_INDELS (custom_Sig_18_tumor_normal)
|
6s |
2s |
2s |
2s |
220.7 MB |
347% |
95.8 MB |
721.2 KB |
0 bytes |
728.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_INDELS (HCC1395_tumor_vs_HCC1395_BL)
|
20s |
15s |
3s |
2s |
247.8 MB |
316% |
95.8 MB |
717.5 KB |
0 bytes |
724.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_SNVS (custom_Sig_18_tumor_normal)
|
19s |
15s |
3s |
1s |
250.2 MB |
266% |
95.8 MB |
730.2 KB |
0 bytes |
736.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_SNVS (HCC1395_tumor_vs_HCC1395_BL)
|
20s |
15s |
2s |
3s |
248.0 MB |
324% |
95.8 MB |
732.1 KB |
0 bytes |
740.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (custom_Sig_18_tumor_normal;chr21_34799195-34799564.bed)
|
2m 47s |
1s |
2m 35s |
11s |
197.7 MB |
93% |
3.5 GB |
3.0 GB |
91.1 MB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (custom_Sig_18_tumor_normal;chr21_44102678-44103072.bed)
|
1m 1s |
2s |
49s |
10s |
123.3 MB |
53% |
3.2 GB |
3.0 GB |
215.8 MB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (custom_Sig_18_tumor_normal;chr21_5117003-5117331.bed)
|
1m 18s |
1s |
1m 5s |
12s |
284.6 MB |
71% |
3.4 GB |
3.0 GB |
379.1 MB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (HCC1395_tumor_vs_HCC1395_BL;chr21_34799195-34799564.bed)
|
1m 20s |
6s |
1m 5s |
9s |
166.5 MB |
71% |
3.3 GB |
3.0 GB |
185.8 MB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (HCC1395_tumor_vs_HCC1395_BL;chr21_44102678-44103072.bed)
|
47s |
1s |
35s |
11s |
107.7 MB |
43% |
3.2 GB |
3.0 GB |
81.4 MB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (HCC1395_tumor_vs_HCC1395_BL;chr21_5117003-5117331.bed)
|
1m 6s |
6s |
51s |
9s |
262.4 MB |
55% |
3.2 GB |
3.0 GB |
161.7 MB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNFILTER (custom_Sig_18_tumor_normal)
|
14s |
1s |
2s |
10s |
482.4 MB |
3287% |
18.2 MB |
382.2 KB |
0 bytes |
25.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNFILTER (HCC1395_tumor_vs_HCC1395_BL)
|
20s |
7s |
3s |
9s |
336.0 MB |
942% |
14.5 MB |
349.0 KB |
0 bytes |
25.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNHAPLOTYPER2 (custom_Sig_18_tumor_normal)
|
59s |
3s |
29s |
26s |
1.9 GB |
1101% |
2.4 GB |
1.9 MB |
0 bytes |
9.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNHAPLOTYPER2 (HCC1395_tumor_vs_HCC1395_BL)
|
41s |
3s |
10s |
27s |
943.9 MB |
924% |
1.5 GB |
669.9 KB |
0 bytes |
8.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:CONCAT_WHATSHAP_TNSEQ_VCFS (custom_Sig_18_tumor_normal)
|
5s |
3s |
- |
- |
3.2 MB |
3011% |
313.9 KB |
66.9 KB |
0 bytes |
76.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:CONCAT_WHATSHAP_TNSEQ_VCFS (HCC1395_tumor_vs_HCC1395_BL)
|
5s |
3s |
- |
- |
3.2 MB |
3086% |
267.3 KB |
50.9 KB |
0 bytes |
60.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:EXTRACT_CHROMOSOMES_TNSEQ (custom_Sig_18_tumor_normal)
|
8s |
6s |
0s |
1s |
3.5 MB |
225% |
107.3 KB |
683 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:EXTRACT_CHROMOSOMES_TNSEQ (HCC1395_tumor_vs_HCC1395_BL)
|
4s |
3s |
0s |
0s |
3.8 MB |
3313% |
117.0 KB |
702 bytes |
0 bytes |
8.0 KB |
1 |