Prefix: s3://natera-rnd-pltf-dev-nextflow-data-01/users/mipeters/semiproductionize/sarek/69814f07/std_run_largest2_smallest2_8a99ba01
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| /variant_calling/facets/1029_BBS1-T1-TDNA-1_23FC2GLT4_s23_vs_1029_BBS1-N1-BDNA-1_2375WFLT3_s23/1029_BBS1-T1-TDNA-1_23FC2GLT4_s23_vs_1029_BBS1-N1-BDNA-1_2375WFLT3_s23.pileup.csv.gz | Feb 02, 2026 7:06 PM | |
| /variant_calling/facets/1029_BBS1-T1-TDNA-1_23FC2GLT4_s23_vs_1029_BBS1-N1-BDNA-1_2375WFLT3_s23/1029_BBS1-T1-TDNA-1_23FC2GLT4_s23_vs_1029_BBS1-N1-BDNA-1_2375WFLT3_s23.alleles.csv.gz | Feb 02, 2026 7:06 PM | |
| /variant_calling/facets/1029_BBS1-T1-TDNA-1_23FC2GLT4_s23_vs_1029_BBS1-N1-BDNA-1_2375WFLT3_s23/1029_BBS1-T1-TDNA-1_23FC2GLT4_s23_vs_1029_BBS1-N1-BDNA-1_2375WFLT3_s23.cnv.png | Feb 02, 2026 7:06 PM | |
| /variant_calling/facets/1029_BBS1-T1-TDNA-1_23FC2GLT4_s23_vs_1029_BBS1-N1-BDNA-1_2375WFLT3_s23/1029_BBS1-T1-TDNA-1_23FC2GLT4_s23_vs_1029_BBS1-N1-BDNA-1_2375WFLT3_s23.genes.csv.gz | Feb 02, 2026 7:06 PM | |
| /variant_calling/facets/1029_BBS1-T1-TDNA-1_23FC2GLT4_s23_vs_1029_BBS1-N1-BDNA-1_2375WFLT3_s23/1029_BBS1-T1-TDNA-1_23FC2GLT4_s23_vs_1029_BBS1-N1-BDNA-1_2375WFLT3_s23.purity_ploidy.csv | Feb 02, 2026 7:06 PM | |
| /variant_calling/facets/1029_BBS1-T1-TDNA-1_23FC2GLT4_s23_vs_1029_BBS1-N1-BDNA-1_2375WFLT3_s23/1029_BBS1-T1-TDNA-1_23FC2GLT4_s23_vs_1029_BBS1-N1-BDNA-1_2375WFLT3_s23.gc_model_coefs.csv | Feb 02, 2026 7:06 PM | |
| /variant_calling/facets/1029_BBS1-T1-TDNA-1_23FC2GLT4_s23_vs_1029_BBS1-N1-BDNA-1_2375WFLT3_s23/1029_BBS1-T1-TDNA-1_23FC2GLT4_s23_vs_1029_BBS1-N1-BDNA-1_2375WFLT3_s23.cov.pdf | Feb 02, 2026 7:06 PM | |
| /variant_calling/facets/1029_BBS1-T1-TDNA-1_23FC2GLT4_s23_vs_1029_BBS1-N1-BDNA-1_2375WFLT3_s23/1029_BBS1-T1-TDNA-1_23FC2GLT4_s23_vs_1029_BBS1-N1-BDNA-1_2375WFLT3_s23.vcf.gz.tbi | Feb 02, 2026 7:06 PM | |
| /variant_calling/facets/1029_BBS1-T1-TDNA-1_23FC2GLT4_s23_vs_1029_BBS1-N1-BDNA-1_2375WFLT3_s23/1029_BBS1-T1-TDNA-1_23FC2GLT4_s23_vs_1029_BBS1-N1-BDNA-1_2375WFLT3_s23.spider.pdf | Feb 02, 2026 7:06 PM | |
| /variant_calling/facets/1029_BBS1-T1-TDNA-1_23FC2GLT4_s23_vs_1029_BBS1-N1-BDNA-1_2375WFLT3_s23/1029_BBS1-T1-TDNA-1_23FC2GLT4_s23_vs_1029_BBS1-N1-BDNA-1_2375WFLT3_s23.segments.csv | Feb 02, 2026 7:06 PM | |
| /variant_calling/facets/1029_BBS1-T1-TDNA-1_23FC2GLT4_s23_vs_1029_BBS1-N1-BDNA-1_2375WFLT3_s23/1029_BBS1-T1-TDNA-1_23FC2GLT4_s23_vs_1029_BBS1-N1-BDNA-1_2375WFLT3_s23.bt_model_coefs.csv | Feb 02, 2026 7:06 PM | |
| /variant_calling/facets/1029_BBS1-T1-TDNA-1_23FC2GLT4_s23_vs_1029_BBS1-N1-BDNA-1_2375WFLT3_s23/1029_BBS1-T1-TDNA-1_23FC2GLT4_s23_vs_1029_BBS1-N1-BDNA-1_2375WFLT3_s23.vcf.gz | Feb 02, 2026 7:06 PM | |
| /annotation/strelka/1029_BICA-T1-TDNA-1_23FC2GLT4_s33_vs_1029_BICA-N1-BDNA-1_2375WFLT3_s32/1029_BICA-T1-TDNA-1_23FC2GLT4_s33_vs_1029_BICA-N1-BDNA-1_2375WFLT3_s32.strelka.somatic_snvs_custom.ann_snpEff_VEP.ann.vcf.gz.tbi | Feb 02, 2026 7:02 PM | |
| /annotation/strelka/1029_BICA-T1-TDNA-1_23FC2GLT4_s33_vs_1029_BICA-N1-BDNA-1_2375WFLT3_s32/1029_BICA-T1-TDNA-1_23FC2GLT4_s33_vs_1029_BICA-N1-BDNA-1_2375WFLT3_s32.strelka.somatic_indels_custom.ann_snpEff_VEP.ann.vcf.gz.tbi | Feb 02, 2026 7:02 PM | |
| /variant_calling/chip_variants/1029_BBS1-N1-BDNA-1_2375WFLT3_s23/somatic_normal/1029_BBS1-N1-BDNA-1_2375WFLT3_s23.readcount_annotated.vcf.gz | Feb 02, 2026 7:02 PM | |
| /variant_calling/chip_variants/1029_BBS1-N1-BDNA-1_2375WFLT3_s23/somatic_normal/1029_BBS1-N1-BDNA-1_2375WFLT3_s23.readcount_annotated.vcf.gz.tbi | Feb 02, 2026 7:02 PM | |
| /annotation/strelka/1029_BICA-T1-TDNA-1_23FC2GLT4_s33_vs_1029_BICA-N1-BDNA-1_2375WFLT3_s32/1029_BICA-T1-TDNA-1_23FC2GLT4_s33_vs_1029_BICA-N1-BDNA-1_2375WFLT3_s32.strelka.somatic_snvs_custom.ann_snpEff_VEP.ann.vcf.gz | Feb 02, 2026 7:01 PM | |
| /annotation/strelka/1029_BICA-T1-TDNA-1_23FC2GLT4_s33_vs_1029_BICA-N1-BDNA-1_2375WFLT3_s32/1029_BICA-T1-TDNA-1_23FC2GLT4_s33_vs_1029_BICA-N1-BDNA-1_2375WFLT3_s32.strelka.somatic_indels_custom.ann_snpEff_VEP.ann.vcf.gz | Feb 02, 2026 7:01 PM | |
| /reports/EnsemblVEP/strelka/1029_BICA-T1-TDNA-1_23FC2GLT4_s33_vs_1029_BICA-N1-BDNA-1_2375WFLT3_s32/1029_BICA-T1-TDNA-1_23FC2GLT4_s33_vs_1029_BICA-N1-BDNA-1_2375WFLT3_s32.strelka.somatic_snvs_custom.ann_snpEff_VEP.ann.summary.html | Feb 02, 2026 7:01 PM | |
| /reports/EnsemblVEP/strelka/1029_BICA-T1-TDNA-1_23FC2GLT4_s33_vs_1029_BICA-N1-BDNA-1_2375WFLT3_s32/1029_BICA-T1-TDNA-1_23FC2GLT4_s33_vs_1029_BICA-N1-BDNA-1_2375WFLT3_s32.strelka.somatic_indels_custom.ann_snpEff_VEP.ann.summary.html | Feb 02, 2026 7:01 PM |