succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:BAMREADCOUNT_BLOOD (1029_BG5-N1-BDNA-1_2375WFLT3_s29) 10m 18s 5s 7m 19s 2m 54s 265.6 MB 100% 29.5 GB 3.4 MB 9.2 GB 3.7 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:BAMREADCOUNT_BLOOD (1029_BICA-N1-BDNA-1_2375WFLT3_s32) 8m 38s 6s 6m 42s 1m 50s 269.0 MB 100% 27.4 GB 3.2 MB 8.6 GB 3.5 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:BAMREADCOUNT_TUMOR (1029_BBCQ-N1-BDNA-1_2375WFLT3_s21) 2m 49s 5s 1m 45s 59s 260.6 MB 100% 10.7 GB 2.8 MB 0 bytes 2.9 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:BAMREADCOUNT_TUMOR (1029_BBS1-N1-BDNA-1_2375WFLT3_s23) 40m 51s 5s 29m 15s 11m 31s 314.0 MB 100% 89.3 GB 3.0 MB 31.2 GB 4.3 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:BAMREADCOUNT_TUMOR (1029_BG5-N1-BDNA-1_2375WFLT3_s29) 2m 7s 5s 1m 25s 37s 258.7 MB 100% 9.6 GB 3.0 MB 0 bytes 3.1 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:BAMREADCOUNT_TUMOR (1029_BICA-N1-BDNA-1_2375WFLT3_s32) 43m 57s 7s 35m 7s 8m 43s 332.2 MB 100% 110.9 GB 3.5 MB 41.4 GB 5.0 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:BCFTOOLS_QUERY (1029_BBCQ-N1-BDNA-1_2375WFLT3_s21) 5s 3s 0s 1s 30.7 MB 8612% 2.5 MB 176.9 KB 0 bytes 184.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:BCFTOOLS_QUERY (1029_BBS1-N1-BDNA-1_2375WFLT3_s23) 6s 4s 0s 1s 28.1 MB 7939% 2.3 MB 155.4 KB 0 bytes 160.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:BCFTOOLS_QUERY (1029_BG5-N1-BDNA-1_2375WFLT3_s29) 5s 4s 0s 0s 29.2 MB 7351% 2.7 MB 192.8 KB 0 bytes 200.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_READCOUNT_ANNOTATION:BCFTOOLS_QUERY (1029_BICA-N1-BDNA-1_2375WFLT3_s32) 6s 5s 0s 0s 30.8 MB 6777% 2.5 MB 181.1 KB 0 bytes 188.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_CONTAMINATION (1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21_vs_1029_BBCQ-N1-BDNA-1_2375WFLT3_s21) 4m 56s 4s 4m 50s 1s 104.7 MB 105% 107.2 MB 998 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_CONTAMINATION (1029_BBS1-T1-TDNA-1_23FC2GLT4_s23_vs_1029_BBS1-N1-BDNA-1_2375WFLT3_s23) 21m 39s 3s 21m 33s 2s 122.8 MB 102% 432.6 MB 1002 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_CONTAMINATION (1029_BG5-T1-TDNA-1_23FC2GLT4_s29_vs_1029_BG5-N1-BDNA-1_2375WFLT3_s29) 5m 14s 4s 5m 7s 2s 105.6 MB 110% 111.7 MB 1001 bytes 6.3 MB 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_CONTAMINATION (1029_BICA-T1-TDNA-1_23FC2GLT4_s33_vs_1029_BICA-N1-BDNA-1_2375WFLT3_s32) 22m 23s 3s 22m 16s 3s 123.1 MB 102% 440.5 MB 1002 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (1029_BBCQ-N1-BDNA-1_2375WFLT3_s21) 8m 39s 2m 56s 1m 47s 3m 55s 603.8 MB 108% 7.4 GB 75.2 MB 15.0 GB 75.4 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (1029_BBCQ-T1-TDNA-1_23FC2GLT4_s21) 4m 40s 2m 57s 38s 1m 4s 579.3 MB 125% 3.5 GB 8.5 MB 7.7 GB 8.6 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (1029_BBS1-N1-BDNA-1_2375WFLT3_s23) 7m 12s 2m 21s 1m 28s 3m 22s 507.6 MB 110% 6.8 GB 69.7 MB 14.0 GB 69.8 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (1029_BBS1-T1-TDNA-1_23FC2GLT4_s23) 20m 52s 2m 21s 7m 19s 11m 11s 1.0 GB 106% 33.4 GB 339.5 MB 47.1 GB 339.9 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (1029_BG5-N1-BDNA-1_2375WFLT3_s29) 9m 3s 2m 57s 1m 51s 4m 14s 484.0 MB 106% 8.3 GB 83.2 MB 16.5 GB 83.3 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (1029_BG5-T1-TDNA-1_23FC2GLT4_s29) 4m 25s 2m 57s 27s 1m 0s 445.0 MB 141% 2.9 GB 5.0 MB 3.3 GB 5.1 MB 1
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