|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (659_bTo_pair;chr12_102480219-102480663.bed)
|
13m 14s |
2s |
8m 20s |
4m 52s |
1.1 GB |
475% |
18.2 GB |
3.0 GB |
16.9 GB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (659_bTo_pair;chr16_25246607-25247490.bed)
|
13m 14s |
1s |
8m 20s |
4m 53s |
1.1 GB |
455% |
17.8 GB |
3.0 GB |
16.0 GB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (659_bTo_pair;chr1_68991-70108.bed)
|
10m 29s |
3s |
5m 35s |
4m 51s |
1.1 GB |
572% |
17.3 GB |
3.0 GB |
16.0 GB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (659_bTo_pair;chr19_15162349-15162662.bed)
|
12m 14s |
2s |
7m 20s |
4m 52s |
1.1 GB |
635% |
18.4 GB |
3.0 GB |
16.6 GB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (659_bTo_pair;chr20_14085521-14085828.bed)
|
12m 59s |
2s |
8m 5s |
4m 52s |
1.1 GB |
520% |
19.8 GB |
3.0 GB |
17.9 GB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (659_bTo_pair;chr4_22420786-22421189.bed)
|
10m 58s |
1s |
6m 5s |
4m 52s |
1.2 GB |
605% |
19.0 GB |
3.0 GB |
17.6 GB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (659_bTo_pair;chr6_138229684-138229952.bed)
|
29m 44s |
1s |
24m 51s |
4m 52s |
1.3 GB |
365% |
23.7 GB |
3.0 GB |
22.5 GB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (659_bTo_pair;chr9_110971973-110972217.bed)
|
10m 13s |
1s |
5m 20s |
4m 52s |
1.1 GB |
385% |
10.8 GB |
3.0 GB |
10.3 GB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNFILTER (659_bTo_pair)
|
17s |
1s |
7s |
8s |
1.3 GB |
11286% |
1.6 GB |
11.8 MB |
48.2 MB |
33.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNHAPLOTYPER2 (659_bTo_pair)
|
1h 9m |
47s |
1h 4m |
4m 32s |
8.7 GB |
1162% |
377.4 GB |
110.6 MB |
121.7 GB |
794.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:CONCAT_WHATSHAP_TNSEQ_VCFS (659_bTo_pair)
|
6s |
1s |
1s |
4s |
3.3 MB |
2474% |
16.6 MB |
5.1 MB |
0 bytes |
5.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:EXTRACT_CHROMOSOMES_TNSEQ (659_bTo_pair)
|
4s |
2s |
0s |
1s |
5.5 MB |
2679% |
192.2 KB |
825 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:FILTER_TNSEQ_VCF_FOR_SOMATIC (659_bTo_pair)
|
3s |
1s |
- |
- |
23.9 MB |
7695% |
5.9 MB |
82.6 KB |
0 bytes |
92.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI (659_bTo_pair)
|
19m 40s |
2s |
15m 14s |
4m 24s |
5.4 GB |
102% |
27.5 GB |
630.2 KB |
20.7 GB |
1.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI_catalin (659_bTo_pair)
|
7m 43s |
2s |
3m 17s |
4m 24s |
3.7 GB |
101% |
6.5 GB |
109.7 KB |
5.4 GB |
288.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI_tso (659_bTo_pair)
|
6m 12s |
2s |
1m 46s |
4m 24s |
3.8 GB |
101% |
3.1 GB |
36.1 KB |
2.8 GB |
104.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:N7_COSMIC_SIGS (659_bTo_pair)
|
2m 5s |
1m 23s |
39s |
2s |
1.2 GB |
142% |
1.4 GB |
44.0 KB |
0 bytes |
68.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SCARHRD (659_bTo_pair)
|
1m 14s |
1m 8s |
2s |
3s |
337.8 MB |
105% |
41.8 MB |
10.3 KB |
1.9 MB |
24.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_CALLING (659_bTo_pair)
|
7m 14s |
1m 21s |
5m 49s |
3s |
20.2 GB |
114% |
1.4 GB |
2.9 GB |
0 bytes |
2.9 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_PLTF (659_bTo_pair)
|
2m 3s |
1m 21s |
39s |
2s |
1.2 GB |
128% |
815.0 MB |
235.6 MB |
0 bytes |
238.0 MB |
1 |