|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (659_dRe_pair;chr12_102480219-102480663.bed)
|
13m 42s |
2s |
8m 21s |
5m 19s |
967.8 MB |
449% |
16.7 GB |
3.0 GB |
15.6 GB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (659_dRe_pair;chr16_25246607-25247490.bed)
|
21m 27s |
2s |
16m 6s |
5m 19s |
1.1 GB |
289% |
18.2 GB |
3.0 GB |
16.8 GB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (659_dRe_pair;chr1_68991-70108.bed)
|
8m 40s |
1s |
3m 20s |
5m 19s |
982.9 MB |
595% |
15.6 GB |
3.0 GB |
14.1 GB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (659_dRe_pair;chr19_15162349-15162662.bed)
|
9m 11s |
1s |
3m 50s |
5m 20s |
1010.0 MB |
567% |
16.1 GB |
3.0 GB |
14.3 GB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (659_dRe_pair;chr20_14085521-14085828.bed)
|
12m 56s |
1s |
7m 35s |
5m 20s |
1018.5 MB |
395% |
17.6 GB |
3.0 GB |
15.8 GB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (659_dRe_pair;chr4_22420786-22421189.bed)
|
9m 56s |
1s |
4m 35s |
5m 20s |
1.0 GB |
601% |
18.6 GB |
3.0 GB |
17.2 GB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (659_dRe_pair;chr6_138229684-138229952.bed)
|
16m 56s |
1s |
11m 36s |
5m 19s |
1.0 GB |
424% |
20.3 GB |
3.0 GB |
18.6 GB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (659_dRe_pair;chr9_110971973-110972217.bed)
|
10m 56s |
2s |
5m 36s |
5m 18s |
963.2 MB |
357% |
9.7 GB |
3.0 GB |
9.3 GB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNFILTER (659_dRe_pair)
|
17s |
2s |
4s |
10s |
740.4 MB |
8359% |
1.9 GB |
14.3 MB |
0 bytes |
35.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNHAPLOTYPER2 (659_dRe_pair)
|
54m 58s |
1m 10s |
49m 29s |
4m 18s |
19.0 GB |
1166% |
333.4 GB |
72.6 MB |
107.8 GB |
753.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:CONCAT_WHATSHAP_TNSEQ_VCFS (659_dRe_pair)
|
6s |
1s |
1s |
4s |
3.3 MB |
2274% |
20.3 MB |
6.5 MB |
0 bytes |
6.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:EXTRACT_CHROMOSOMES_TNSEQ (659_dRe_pair)
|
5s |
3s |
0s |
1s |
5.7 MB |
2682% |
192.7 KB |
821 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:FILTER_TNSEQ_VCF_FOR_SOMATIC (659_dRe_pair)
|
4s |
2s |
- |
- |
18.7 MB |
5033% |
7.2 MB |
67.5 KB |
0 bytes |
76.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI (659_dRe_pair)
|
17m 36s |
1s |
13m 52s |
3m 43s |
8.9 GB |
101% |
26.0 GB |
638.9 KB |
15.4 GB |
1.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI_catalin (659_dRe_pair)
|
6m 40s |
1s |
2m 56s |
3m 43s |
1.8 GB |
101% |
5.6 GB |
112.8 KB |
4.6 GB |
264.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI_tso (659_dRe_pair)
|
5m 32s |
2s |
1m 47s |
3m 43s |
3.4 GB |
101% |
2.8 GB |
36.8 KB |
2.5 GB |
104.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:N7_COSMIC_SIGS (659_dRe_pair)
|
2m 29s |
1m 38s |
47s |
3s |
1.2 GB |
142% |
1.3 GB |
42.9 KB |
0 bytes |
68.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SCARHRD (659_dRe_pair)
|
1m 28s |
1m 23s |
2s |
2s |
338.6 MB |
118% |
41.8 MB |
20.2 KB |
1.2 MB |
32.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_CALLING (659_dRe_pair)
|
8m 12s |
1m 36s |
6m 30s |
5s |
17.7 GB |
122% |
1.3 GB |
2.8 GB |
0 bytes |
2.8 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_PLTF (659_dRe_pair)
|
2m 29s |
1m 37s |
48s |
3s |
1.2 GB |
126% |
814.4 MB |
235.6 MB |
0 bytes |
238.0 MB |
1 |