|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_FACETS:CNV_FACETS (custom_Sig_18_tumor_normal)
|
7m 18s |
1m 37s |
5m 17s |
23s |
3.6 GB |
171% |
30.7 GB |
27.7 GB |
0 bytes |
1.4 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_FACETS:CNV_FACETS (HCC1395_tumor_vs_HCC1395_BL)
|
6m 51s |
1m 38s |
4m 48s |
24s |
3.6 GB |
177% |
27.7 GB |
25.1 GB |
0 bytes |
1.4 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA:MANTA_SOMATIC (custom_Sig_18_tumor_normal)
|
1m 3s |
3s |
50s |
10s |
322.5 MB |
245% |
9.4 GB |
3.0 GB |
878.0 MB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA:MANTA_SOMATIC (HCC1395_tumor_vs_HCC1395_BL)
|
49s |
4s |
35s |
10s |
238.3 MB |
189% |
6.7 GB |
3.0 GB |
185.4 MB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_INDELS (custom_Sig_18_tumor_normal)
|
6s |
1s |
2s |
3s |
295.8 MB |
320% |
95.9 MB |
721.2 KB |
0 bytes |
728.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_INDELS (HCC1395_tumor_vs_HCC1395_BL)
|
20s |
15s |
2s |
3s |
312.0 MB |
318% |
95.8 MB |
717.6 KB |
0 bytes |
724.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_SNVS (custom_Sig_18_tumor_normal)
|
6s |
2s |
2s |
2s |
297.1 MB |
322% |
95.8 MB |
730.2 KB |
0 bytes |
736.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_SNVS (HCC1395_tumor_vs_HCC1395_BL)
|
20s |
16s |
3s |
1s |
306.1 MB |
332% |
95.9 MB |
732.1 KB |
0 bytes |
740.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (custom_Sig_18_tumor_normal;chr21_34799195-34799564.bed)
|
3m 0s |
1s |
2m 49s |
10s |
193.4 MB |
85% |
3.5 GB |
3.0 GB |
91.7 MB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (custom_Sig_18_tumor_normal;chr21_44102678-44103072.bed)
|
1m 0s |
1s |
50s |
9s |
123.1 MB |
53% |
3.2 GB |
3.0 GB |
44.9 MB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (custom_Sig_18_tumor_normal;chr21_5117003-5117331.bed)
|
1m 17s |
3s |
1m 4s |
10s |
290.4 MB |
70% |
3.4 GB |
3.0 GB |
371.3 MB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (HCC1395_tumor_vs_HCC1395_BL;chr21_34799195-34799564.bed)
|
1m 3s |
3s |
49s |
11s |
166.7 MB |
64% |
3.3 GB |
3.0 GB |
187.8 MB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (HCC1395_tumor_vs_HCC1395_BL;chr21_44102678-44103072.bed)
|
48s |
3s |
34s |
11s |
107.7 MB |
43% |
3.2 GB |
3.0 GB |
83.7 MB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (HCC1395_tumor_vs_HCC1395_BL;chr21_5117003-5117331.bed)
|
47s |
3s |
35s |
9s |
258.2 MB |
56% |
3.2 GB |
3.0 GB |
201.2 MB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNFILTER (custom_Sig_18_tumor_normal)
|
13s |
1s |
2s |
9s |
486.1 MB |
4586% |
31.8 MB |
565.0 KB |
0 bytes |
25.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNFILTER (HCC1395_tumor_vs_HCC1395_BL)
|
13s |
1s |
2s |
9s |
485.6 MB |
2658% |
31.2 MB |
521.3 KB |
0 bytes |
25.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNHAPLOTYPER2 (custom_Sig_18_tumor_normal)
|
1m 47s |
38s |
46s |
22s |
1.9 GB |
1115% |
2.4 GB |
2.2 MB |
0 bytes |
9.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNHAPLOTYPER2 (HCC1395_tumor_vs_HCC1395_BL)
|
1m 21s |
40s |
17s |
23s |
940.7 MB |
1026% |
1.5 GB |
992.4 KB |
0 bytes |
8.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:CONCAT_WHATSHAP_TNSEQ_VCFS (custom_Sig_18_tumor_normal)
|
3s |
1s |
1s |
1s |
3.3 MB |
8140% |
608.9 KB |
162.6 KB |
0 bytes |
168.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:CONCAT_WHATSHAP_TNSEQ_VCFS (HCC1395_tumor_vs_HCC1395_BL)
|
3s |
1s |
- |
- |
3.1 MB |
7455% |
535.0 KB |
139.4 KB |
0 bytes |
144.0 KB |
1 |