|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:EXTRACT_CHROMOSOMES_TNSEQ (custom_Sig_18_tumor_normal)
|
8s |
6s |
0s |
1s |
5.6 MB |
2366% |
119.0 KB |
697 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:EXTRACT_CHROMOSOMES_TNSEQ (HCC1395_tumor_vs_HCC1395_BL)
|
3s |
2s |
0s |
0s |
3.7 MB |
2146% |
120.2 KB |
702 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:FILTER_TNSEQ_VCF_FOR_SOMATIC (custom_Sig_18_tumor_normal)
|
3s |
1s |
- |
- |
22.9 MB |
7235% |
304.3 KB |
21.9 KB |
0 bytes |
32.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:FILTER_TNSEQ_VCF_FOR_SOMATIC (HCC1395_tumor_vs_HCC1395_BL)
|
3s |
1s |
- |
- |
22.5 MB |
7130% |
279.9 KB |
21.3 KB |
0 bytes |
32.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MIMSI_ANALYZE (custom_Sig_18_tumor_normal)
|
28s |
15s |
9s |
3s |
3.9 GB |
814% |
512.3 MB |
38.3 MB |
0 bytes |
38.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MIMSI_ANALYZE (HCC1395_tumor_vs_HCC1395_BL)
|
26s |
16s |
6s |
3s |
3.8 GB |
854% |
357.2 MB |
15.9 MB |
0 bytes |
15.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI_catalin (custom_Sig_18_tumor_normal)
|
6s |
1s |
2s |
3s |
103.8 MB |
102% |
52.1 MB |
3.4 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI_catalin (HCC1395_tumor_vs_HCC1395_BL)
|
6s |
2s |
- |
- |
12.1 MB |
103% |
30.8 MB |
3.3 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI (custom_Sig_18_tumor_normal)
|
9s |
2s |
3s |
4s |
208.2 MB |
103% |
81.8 MB |
5.9 KB |
0 bytes |
32.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI (HCC1395_tumor_vs_HCC1395_BL)
|
6s |
2s |
1s |
3s |
94.5 MB |
105% |
50.0 MB |
5.8 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI_tso (custom_Sig_18_tumor_normal)
|
6s |
1s |
1s |
4s |
11.6 MB |
103% |
25.0 MB |
1.8 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI_tso (HCC1395_tumor_vs_HCC1395_BL)
|
5s |
2s |
1s |
2s |
11.5 MB |
101% |
14.0 MB |
1.8 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:N7_COSMIC_SIGS (custom_Sig_18_tumor_normal)
|
53s |
34s |
16s |
2s |
1.2 GB |
303% |
97.0 MB |
39.4 KB |
0 bytes |
68.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:N7_COSMIC_SIGS (HCC1395_tumor_vs_HCC1395_BL)
|
57s |
43s |
11s |
2s |
1.1 GB |
323% |
89.3 MB |
34.7 KB |
0 bytes |
64.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SCARHRD (custom_Sig_18_tumor_normal)
|
31s |
27s |
1s |
2s |
222.0 MB |
1077% |
41.8 MB |
4.9 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SCARHRD (HCC1395_tumor_vs_HCC1395_BL)
|
34s |
30s |
1s |
2s |
221.8 MB |
1068% |
41.8 MB |
5.1 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_CALLING (custom_Sig_18_tumor_normal)
|
53s |
1s |
48s |
3s |
2.9 GB |
365% |
695.7 MB |
854.0 MB |
0 bytes |
856.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_CALLING (HCC1395_tumor_vs_HCC1395_BL)
|
1m 32s |
42s |
46s |
3s |
2.7 GB |
378% |
694.7 MB |
848.9 MB |
0 bytes |
851.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_PLTF (custom_Sig_18_tumor_normal)
|
1m 3s |
34s |
26s |
2s |
1.2 GB |
532% |
479.8 MB |
235.6 MB |
0 bytes |
238.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_PLTF (HCC1395_tumor_vs_HCC1395_BL)
|
1m 12s |
43s |
26s |
2s |
1.2 GB |
527% |
479.7 MB |
235.6 MB |
0 bytes |
238.1 MB |
1 |