|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_CALL (Sig_18_tissue_vs_Sig_18_Blood)
|
17s |
13s |
3s |
1s |
131.2 MB |
881% |
75.3 MB |
68.3 KB |
0 bytes |
84.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_EXPORT (HCC1395_tumor_vs_HCC1395_BL)
|
7s |
3s |
3s |
1s |
137.3 MB |
941% |
75.3 MB |
69.6 KB |
0 bytes |
84.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_EXPORT (Sig_18_tissue_vs_Sig_18_Blood)
|
6s |
2s |
3s |
1s |
136.2 MB |
956% |
75.3 MB |
69.3 KB |
0 bytes |
84.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_GENEMETRICS (HCC1395_tumor_vs_HCC1395_BL)
|
16s |
12s |
2s |
2s |
136.0 MB |
922% |
75.4 MB |
68.0 KB |
0 bytes |
84.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_GENEMETRICS (Sig_18_tissue_vs_Sig_18_Blood)
|
7s |
3s |
3s |
1s |
133.1 MB |
513% |
75.4 MB |
68.0 KB |
0 bytes |
84.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_ASCAT:ASCAT (HCC1395_tumor_vs_HCC1395_BL)
|
1m 1s |
12s |
37s |
12s |
1.7 GB |
252% |
12.6 GB |
112.5 MB |
0 bytes |
112.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_ASCAT:ASCAT (Sig_18_tissue_vs_Sig_18_Blood)
|
1m 7s |
3s |
52s |
12s |
1.7 GB |
204% |
12.7 GB |
112.4 MB |
0 bytes |
112.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_FACETS:CNV_FACETS (HCC1395_tumor_vs_HCC1395_BL)
|
4m 53s |
47s |
3m 43s |
22s |
2.9 GB |
155% |
26.6 GB |
24.2 GB |
0 bytes |
1.4 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_FACETS:CNV_FACETS (Sig_18_tissue_vs_Sig_18_Blood)
|
5m 4s |
46s |
3m 58s |
19s |
3.0 GB |
152% |
28.9 GB |
26.2 GB |
0 bytes |
1.4 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_FACETS:CONVERT_NORMAL_TO_BAM (HCC1395_BL)
|
17s |
2s |
4s |
11s |
97.9 MB |
212% |
220.1 MB |
106.6 MB |
0 bytes |
106.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_FACETS:CONVERT_NORMAL_TO_BAM (Sig_18_Blood)
|
17s |
2s |
5s |
10s |
99.0 MB |
211% |
262.0 MB |
132.3 MB |
0 bytes |
132.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_FACETS:CONVERT_TUMOR_TO_BAM (HCC1395_tumor)
|
21s |
3s |
8s |
10s |
100.7 MB |
214% |
477.6 MB |
262.1 MB |
0 bytes |
262.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_FACETS:CONVERT_TUMOR_TO_BAM (Sig_18_tissue)
|
33s |
2s |
20s |
11s |
114.3 MB |
217% |
905.4 MB |
532.9 MB |
0 bytes |
533.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA:MANTA_SOMATIC (HCC1395_tumor_vs_HCC1395_BL)
|
1m 18s |
5s |
1m 4s |
9s |
113.1 MB |
159% |
5.6 GB |
4.4 MB |
0 bytes |
3.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA:MANTA_SOMATIC (Sig_18_tissue_vs_Sig_18_Blood)
|
1m 17s |
4s |
1m 5s |
8s |
567.7 MB |
197% |
5.4 GB |
4.6 MB |
0 bytes |
3.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:CALCULATECONTAMINATION (HCC1395_tumor_vs_HCC1395_BL)
|
6s |
2s |
3s |
1s |
249.7 MB |
266% |
95.4 MB |
692.8 KB |
0 bytes |
700.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:CALCULATECONTAMINATION (Sig_18_tissue_vs_Sig_18_Blood)
|
7s |
2s |
3s |
2s |
239.5 MB |
269% |
95.4 MB |
692.8 KB |
0 bytes |
700.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:FILTERMUTECTCALLS (HCC1395_tumor_vs_HCC1395_BL)
|
15s |
2s |
4s |
9s |
319.7 MB |
329% |
129.1 MB |
745.1 KB |
0 bytes |
756.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:FILTERMUTECTCALLS (Sig_18_tissue_vs_Sig_18_Blood)
|
15s |
2s |
3s |
10s |
346.6 MB |
331% |
139.1 MB |
748.9 KB |
0 bytes |
760.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MUTECT2:GATHERPILEUPSUMMARIES_NORMAL (HCC1395_BL)
|
5s |
1s |
3s |
1s |
252.1 MB |
279% |
95.6 MB |
710.7 KB |
0 bytes |
712.0 KB |
1 |