|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (659_bTo_pair;chr12_102480219-102480663.bed)
|
13m 54s |
1s |
8m 35s |
5m 18s |
1.1 GB |
446% |
18.2 GB |
3.0 GB |
16.5 GB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (659_bTo_pair;chr16_25246607-25247490.bed)
|
15m 24s |
1s |
10m 5s |
5m 18s |
1.2 GB |
378% |
17.8 GB |
3.0 GB |
16.0 GB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (659_bTo_pair;chr1_68991-70108.bed)
|
10m 54s |
1s |
5m 35s |
5m 18s |
1.1 GB |
565% |
17.3 GB |
3.0 GB |
15.7 GB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (659_bTo_pair;chr19_15162349-15162662.bed)
|
13m 24s |
2s |
8m 5s |
5m 17s |
1.1 GB |
584% |
18.4 GB |
3.0 GB |
17.0 GB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (659_bTo_pair;chr20_14085521-14085828.bed)
|
13m 24s |
2s |
8m 5s |
5m 17s |
1.1 GB |
524% |
19.8 GB |
3.0 GB |
17.9 GB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (659_bTo_pair;chr4_22420786-22421189.bed)
|
12m 53s |
1s |
7m 35s |
5m 17s |
1.2 GB |
659% |
19.0 GB |
3.0 GB |
18.4 GB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (659_bTo_pair;chr6_138229684-138229952.bed)
|
36m 55s |
1s |
31m 36s |
5m 18s |
1.3 GB |
369% |
23.7 GB |
3.0 GB |
22.9 GB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (659_bTo_pair;chr9_110971973-110972217.bed)
|
11m 23s |
1s |
6m 5s |
5m 17s |
1.1 GB |
345% |
10.8 GB |
3.0 GB |
10.3 GB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNFILTER (659_bTo_pair)
|
17s |
2s |
4s |
10s |
708.3 MB |
7598% |
1.6 GB |
11.7 MB |
0 bytes |
33.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNHAPLOTYPER2 (659_bTo_pair)
|
1h 9m |
31s |
1h 4m |
4m 29s |
8.5 GB |
1163% |
377.3 GB |
110.6 MB |
121.7 GB |
794.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:CONCAT_WHATSHAP_TNSEQ_VCFS (659_bTo_pair)
|
33s |
28s |
1s |
4s |
6.5 MB |
238% |
16.6 MB |
5.1 MB |
0 bytes |
5.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:EXTRACT_CHROMOSOMES_TNSEQ (659_bTo_pair)
|
4s |
2s |
0s |
1s |
5.5 MB |
2032% |
226.3 KB |
817 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:FILTER_TNSEQ_VCF_FOR_SOMATIC (659_bTo_pair)
|
4s |
2s |
- |
- |
23.5 MB |
7612% |
5.9 MB |
82.6 KB |
0 bytes |
92.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI (659_bTo_pair)
|
21m 43s |
3s |
17m 33s |
4m 7s |
5.4 GB |
101% |
27.5 GB |
630.2 KB |
23.4 GB |
1.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI_catalin (659_bTo_pair)
|
7m 54s |
2s |
3m 43s |
4m 9s |
3.7 GB |
101% |
6.5 GB |
109.7 KB |
5.7 GB |
276.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI_tso (659_bTo_pair)
|
6m 13s |
2s |
2m 3s |
4m 8s |
3.8 GB |
101% |
3.1 GB |
36.1 KB |
2.9 GB |
104.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:N7_COSMIC_SIGS (659_bTo_pair)
|
57s |
2s |
52s |
2s |
1.2 GB |
144% |
1.4 GB |
43.9 KB |
0 bytes |
68.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SCARHRD (659_bTo_pair)
|
55s |
49s |
4s |
1s |
324.6 MB |
163% |
41.8 MB |
10.3 KB |
0 bytes |
24.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_CALLING (659_bTo_pair)
|
5m 11s |
1m 27s |
3m 40s |
3s |
20.2 GB |
99% |
1.4 GB |
2.9 GB |
0 bytes |
2.9 GB |
2 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_PLTF (659_bTo_pair)
|
55s |
3s |
49s |
2s |
1.2 GB |
125% |
816.9 MB |
235.6 MB |
0 bytes |
238.0 MB |
1 |