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Path
/multiqc/multiqc_plots Feb 26, 2026 10:03 AM
/multiqc/multiqc_data Feb 26, 2026 10:03 AM
/multiqc/multiqc_report.html Feb 26, 2026 10:03 AM
/variant_calling/hrd/TiH/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1/FACETS/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1.arm_level.txt Feb 26, 2026 10:01 AM
/variant_calling/hrd/TiH/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1/FACETS/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1_hisens.rds Feb 26, 2026 10:01 AM
/variant_calling/hrd/TiH/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1/FACETS/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1_purity.rds Feb 26, 2026 10:01 AM
/variant_calling/hrd/TiH/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1/FACETS/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1_hisens.png Feb 26, 2026 10:01 AM
/variant_calling/hrd/TiH/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1/FACETS/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1.gene_level.txt Feb 26, 2026 10:01 AM
/variant_calling/hrd/TiH/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1/FACETS/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1.gene_level_purity.txt Feb 26, 2026 10:01 AM
/variant_calling/hrd/TiH/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1/FACETS/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1_hisens_diplogR.unadjusted.seg Feb 26, 2026 10:01 AM
/variant_calling/hrd/TiH/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1/FACETS/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1_purity.png Feb 26, 2026 10:01 AM
/variant_calling/hrd/TiH/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1/FACETS/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1_hisens.segments.txt Feb 26, 2026 10:01 AM
/variant_calling/hrd/TiH/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1/FACETS/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1_hisens_diplogR.adjusted.seg Feb 26, 2026 10:01 AM
/variant_calling/hrd/TiH/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1/FACETS/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1_purity.segments.txt Feb 26, 2026 10:01 AM
/variant_calling/hrd/TiH/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1/FACETS/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1_purity_diplogR.adjusted.seg Feb 26, 2026 10:01 AM
/variant_calling/hrd/TiH/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1.hrd_score_results.tsv Feb 26, 2026 10:01 AM
/variant_calling/hrd/TiH/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1/FACETS/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1.txt Feb 26, 2026 10:01 AM
/variant_calling/hrd/TiH/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1/FACETS/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1.qc.txt Feb 26, 2026 10:01 AM
/variant_calling/hrd/TiH/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1/FACETS/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1_purity_diplogR.unadjusted.seg Feb 26, 2026 10:01 AM
/variant_calling/hrd/N7/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1/1136_7L-T1-TDNA-1_A23H5VJLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1.signature_exposures.csv Feb 26, 2026 10:00 AM
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